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Leveraging Unstructured Data in Electronic Health Records to Detect Adverse Events from Pediatric Drug Use: A Scoping
Su Golder1, Karen O'Connor2, Guillermo Lopez-Garcia3
1Department of Health Sciences, University of York, York, United Kingdom;
Insights
Research on identifying adverse drug events (ADEs) in children using electronic health records (EHRs) is limited. Unstructured EHR data shows promise for pediatric pharmacovigilance, but advanced methods are needed.
Area of Science:
- Pharmacovigilance
- Health Informatics
- Pediatric Drug Safety
Background:
- Adverse drug events (ADEs) in children present significant public health concerns.
- Existing research on detecting and monitoring pediatric ADEs is notably limited.
- Electronic health records (EHRs) contain valuable unstructured data for pharmacovigilance.
Purpose of the Study:
- To conduct a scoping review on the utilization of unstructured EHR data for identifying ADEs in pediatric populations.
- To assess the current state of research and identify gaps in pediatric pharmacovigilance using EHR data.
Main Methods:
- Systematic search of six major databases (MEDLINE, Embase, IEEE Xplore, etc.) conducted in September 2024.
- Inclusion criteria applied to 984 retrieved records, resulting in the selection of nine relevant studies.
- Analysis focused on methods for extracting ADE information from unstructured EHR text.
Main Results:
- A significant research gap exists concerning the identification of ADEs in children.
- Unstructured EHR data holds potential for enhancing pediatric pharmacovigilance.
- Current natural language processing (NLP) methods for ADE extraction from EHRs show limitations in generalizability and contextual interpretation.
Conclusions:
- Despite limited current use, unstructured EHR data is valuable for pediatric pharmacovigilance.
- Advances in transformer-based models and large language models (LLMs) can overcome existing NLP challenges.
- Future research should leverage advanced AI to utilize EHR data at scale for improved pediatric drug safety.
Abstract:
Adverse drug events (ADEs) in pediatric populations pose significant public health challenges, yet research on their detection and monitoring remains limited. This scoping review evaluates the use of unstructured data from electronic health records (EHRs) to identify ADEs in children. We searched six databases, including MEDLINE, Embase, and IEEE Xplore, in September 2024. From 984 records, only nine studies met our inclusion criteria, indicating a significant gap in research toward identifying ADEs in children. We found that unstructured data in EHRs can indeed be of value and enhance pediatric pharmacovigilance, although their use has been so far very limited. Traditional natural language processing methods have been employed to extract ADEs, but the approaches utilized face challenges in generalizability and context interpretation. These challenges could be addressed with recent advances in transformer-based models and large language models, unlocking the use of EHR data at scale for pediatric pharmacovigilance.
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