Related Experiment Video
Updated: Sep 11, 2025

High-throughput Antiviral Assays to Screen for Inhibitors of Zika Virus Replication
Published on: October 30, 2021
Discovery of Inhibitors Targeting the RNA-Dependent RNA Polymerase of the Zika Virus
Vanessa Aitken1, Anthony F T Moore2, Manuel Terrazas-López1
1Department of Chemistry and Biochemistry, The University of Texas at El Paso, El Paso, TX 79968, USA.
Abstract:
The Zika virus (ZIKV) is a Orthoflavivirus linked to several neurological and developmental diseases, and it remains a significant global health threat for which no treatments or vaccines are currently available. In this study, we optimized the malachite green colorimetric assay, previously used to measure the RNA-dependent RNA polymerase (RdRp) activity of the hepatitis C and foot-and-mouth disease viruses, and applied this assay to identify inhibitors of ZIKV RdRp, an enzyme essential for viral replication. Inhibitor screening was conducted using 204 compounds from the Natural Product Set IV of the National Cancer Institute Developmental Therapeutics Program. We identified two compounds, purpurogallin and digallic acid, as inhibitors of ZIKV RdRp. Future studies will characterize the potency and elucidate the mechanisms of action of these compounds.
Insights
Researchers identified two natural compounds, purpurogallin and digallic acid, that inhibit Zika virus RNA-dependent RNA polymerase (RdRp). This discovery offers potential new avenues for developing treatments against the Zika virus (ZIKV).
Area of Science:
- Virology
- Drug Discovery
- Biochemistry
Background:
- Zika virus (ZIKV), an *Orthoflavivirus*, is associated with severe neurological and developmental conditions.
- There are currently no approved treatments or vaccines for ZIKV infections, posing a significant global health challenge.
Purpose of the Study:
- To identify novel inhibitors of ZIKV's RNA-dependent RNA polymerase (RdRp), an enzyme crucial for viral replication.
- To adapt and optimize the malachite green colorimetric assay for screening ZIKV RdRp activity.
Main Methods:
- Screening of 204 compounds from the National Cancer Institute's Natural Product Set IV.
- Utilizing an optimized malachite green colorimetric assay to measure ZIKV RdRp activity.
- Identifying compounds that demonstrate inhibitory effects on the target enzyme.
Main Results:
- Two natural compounds, purpurogallin and digallic acid, were identified as inhibitors of ZIKV RdRp.
- The malachite green assay was successfully optimized for ZIKV RdRp activity screening.
- The identified compounds represent potential leads for antiviral drug development.
Conclusions:
- Purpurogallin and digallic acid show promise as inhibitors of ZIKV replication.
- Further research is warranted to determine the precise mechanisms of action and therapeutic potential of these compounds.
- This study provides a foundation for developing new ZIKV therapeutics.
Related Concept Videos
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
Experimental RNAi

