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Cumulative dose responses for adapting biological systems.

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This study introduces the cumulative dose response (cDR) to explain biological adaptation. The integral feedback (IFB) motif, unlike incoherent feedforward loops, can generate the non-monotonic cDR observed in experiments.

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Area of Science:

  • Systems Biology
  • Immunology
  • Pharmacology

Background:

  • Physiological adaptation is crucial for biological systems, typically modeled as an asymptotic dose response (DR).
  • Existing models struggle to explain transient, cumulative dose responses (cDR) observed in biological systems like cytokine accumulation.

Purpose of the Study:

  • To develop the concept of a cumulative dose response (cDR) as a finite-time measure of adaptation.
  • To investigate network motifs capable of generating non-monotonic cDR, consistent with experimental data.

Main Methods:

  • Developed the cumulative dose response (cDR) by integrating the response variable over a fixed time interval.
  • Analyzed two types of incoherent feedforward loops and one integral feedback (IFB) motif for their cDR properties.

Main Results:

  • Incoherent feedforward loops, despite non-monotonic DR, consistently produce monotonic cDR.
  • The integral feedback (IFB) motif is shown to generate non-monotonic cDR, aligning with experimental observations.

Conclusions:

  • The IFB motif is a viable mechanism for explaining the non-monotonic cDR observed in T-cell cytokine accumulation.
  • Incoherent feedforward loops are inconsistent with experimental data exhibiting non-monotonic cDR.