Related Experiment Video

Updated: Sep 11, 2025

Spatial Profiling of Protein and RNA Expression in Tissue: An Approach to Fine-Tune Virtual Microdissection
09:19

Spatial Profiling of Protein and RNA Expression in Tissue: An Approach to Fine-Tune Virtual Microdissection

Published on: July 6, 2022

5.0K

Winnow-KAN: single-cell RNA-seq location recovery with small-gene-set spatial transcriptomics

Yuyang Zhang1, Qihuang Zhang2

  • 1Department of Epidemiology, Biostatistics and Occupational Health, McGill University, Montreal, Quebec, Canada.

BMC Bioinformatics
|August 13, 2025
PubMed
Summary

No abstract available in PubMed .

Keywords:
Cell mappingDeep learningKolmogorov-Arnold networkSingle-cell RNA-seqSpatial transcriptomics

More Related Videos

Droplet Barcoding-Based Single Cell Transcriptomics of Adult Mammalian Tissues
10:12

Droplet Barcoding-Based Single Cell Transcriptomics of Adult Mammalian Tissues

Published on: January 10, 2019

18.7K
Low-input Nucleus Isolation and Multiplexing with Barcoded Antibodies of Mouse Sympathetic Ganglia for Single-nucleus RNA Sequencing
10:44

Low-input Nucleus Isolation and Multiplexing with Barcoded Antibodies of Mouse Sympathetic Ganglia for Single-nucleus RNA Sequencing

Published on: March 23, 2022

4.3K

Related Experiment Videos

Last Updated: Sep 11, 2025

Spatial Profiling of Protein and RNA Expression in Tissue: An Approach to Fine-Tune Virtual Microdissection
09:19

Spatial Profiling of Protein and RNA Expression in Tissue: An Approach to Fine-Tune Virtual Microdissection

Published on: July 6, 2022

5.0K
Droplet Barcoding-Based Single Cell Transcriptomics of Adult Mammalian Tissues
10:12

Droplet Barcoding-Based Single Cell Transcriptomics of Adult Mammalian Tissues

Published on: January 10, 2019

18.7K
Low-input Nucleus Isolation and Multiplexing with Barcoded Antibodies of Mouse Sympathetic Ganglia for Single-nucleus RNA Sequencing
10:44

Low-input Nucleus Isolation and Multiplexing with Barcoded Antibodies of Mouse Sympathetic Ganglia for Single-nucleus RNA Sequencing

Published on: March 23, 2022

4.3K

Related Concept Videos

RNA-seq03:21

RNA-seq

10.4K
RNA sequencing, or RNA-Seq, is a high-throughput sequencing technology used to study the transcriptome of a cell. Transcriptomics helps to interpret the functional elements of a genome and identify the molecular constituents of an organism. Additionally, it also helps in understanding the development of an organism and the occurrence of diseases. 
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while...
10.4K
DNA Microarrays02:34

DNA Microarrays

18.4K
Microarrays are high-throughput and relatively inexpensive assays that can be automated to analyze large quantities of data at a time. They are used in genome-wide studies to compare gene or protein expression under two varied conditions, such as healthy and diseased states. Microarrays consist of glass or silica slides on which probe molecules are covalently attached through surface functionalization. Most commonly, the slides are prepared through the chemisorption of silanes to silica...
18.4K

Articles linked to this work by shared authors, journal, and citation graph.

Generalized SIMEX Method: Polynomial Approximation for Extrapolation.

Statistics in medicine·2026

SpaTM: topic models for inferring spatially informed transcriptional programs.

Briefings in bioinformatics·2025

Chassis-based fiber-coupled optical probe design for reproducible quantitative diffuse optical spectroscopy measurements.

PloS one·2024

Leveraging spatial transcriptomics data to recover cell locations in single-cell RNA-seq with CeLEry.

Nature communications·2023

Sensitivity analysis of error-contaminated time series data under autoregressive models with the application of COVID-19 data.

Journal of applied statistics·2023

Sentiment analysis and causal learning of COVID-19 tweets prior to the rollout of vaccines.

PloS one·2023

Prioritising search for virtual screening via preliminary interpretable low-feature likelihood-based rankings of drug-target activity measures.

BMC bioinformatics·2026

A novel attention mechanism for noise-adaptive and robust segmentation of microtubules in microscopy images.

BMC bioinformatics·2026

Enhancing tumor T cell antigen prediction by integrating deep protein representations.

BMC bioinformatics·2026

RiboZAP: a species-agnostic pipeline for rRNA depletion probe design in metatranscriptomics.

BMC bioinformatics·2026

Model-based quantification of protein-protein interaction aberrations for exploring dysregulated signalling pathways through pathway maps and gene expression levels.

BMC bioinformatics·2026

Research on multi-trait genome association study method based on Shannon information entropy.

BMC bioinformatics·2026

Distinct 5' and 3' coverage biases shape transcriptome interpretation in Nanopore direct RNA versus PCR-cDNA sequencing.

BMC genomics·2026

Functionally Guided Graph Learning for Robust Cross-Patient Cell-Type Annotation in Single-Cell RNA Sequencing.

Journal of chemical information and modeling·2026

Construction and validation of a phenotypic prediction model for bacterial gentamicin resistance using deep learning with gene sequences.

Microbiology spectrum·2026

Performance of next-generation sequencing technologies for detecting drug-resistant tuberculosis in people with pulmonary tuberculosis.

The Cochrane database of systematic reviews·2026

Next-generation sequencing and bioinformatics capacity: findings from a multi-country survey to guide the genomics costing tool 2.0.

Frontiers in public health·2026

PRED-TMSdeep: Prediction of Transmembrane Topology and Signal Peptides Using Deep Learning.

Biology·2026
See all related articles
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies
Jove
Visualize
Contact Us