Related Experiment Video
Updated: Sep 11, 2025

Diffusion Tensor Magnetic Resonance Imaging in the Analysis of Neurodegenerative Diseases
Published on: July 28, 2013
FAT1 weighted MRI: Diffusion meets anatomical imaging and application in thalamic surgery for tremor
Taco Goedemans1,2, Francisca Ferreira1, Thomas Wirth1,3
1Unit of Functional Neurosurgery, UCL Queen Square Institute of Neurology & The National Hospital for Neurology and Neurosurgery (UCLH), London, United Kingdom.
Abstract:
Patient-specific targeting of the Ventral intermediate nucleus (Vim) of the thalamus can be achieved with MR connectivity. Nevertheless, there are several drawbacks to using tractography-based targeting methods to visualise distinct thalamic nuclei (e.g., subjective region of interest selection, and thresholding of resulting tracts and clusters). Fractional anisotropy (FA) mapping, another product of diffusion MRI (dMRI), does not rely on tractography, and could thus be clinically more viable for discerning thalamic anatomy for stereotactic surgery. The aim of this study is to develop and present a hybrid, high-resolution, and high-fidelity imaging modality that combines contrast from FA maps as well as anatomical T1 sequences (FAT1 imaging); and to evaluate FAT1 based Vim-target definition. Imaging and outcome data of 35 consecutive refractory tremor patients who had undergone 43 connectivity guided deep brain stimulation (DBS) and/or radiofrequency thermocoagulation (RF-T) between 2013 and 2021 were included. First, the pre-operatively acquired dMRI and MPRAGE sequences were used to create FAT1 maps in retrospect. Then, an FAT1 based Vim-target was planned by an experienced functional neurosurgeon who was blinded for patient outcome. Finally, to investigate FAT1 based targeting, a post-hoc analysis was carried out of the degree of overlap between the newly created FAT1 based Vim-target, and the volume of tissue activation (VTA, in case of DBS) or lesion volume (in case of RF-T). This degree of overlap was compared between favourable and unfavourable outcome groups: outcomes were measured by experts blinded for imaging data at the last follow-up using a Clinical Global Impression-Improvement score (CGI-I), where a CGI-I score of 1-2 (i.e., FTMTRS improvement of ≥50%) was considered favourable. In 36 of the 43 (84%) performed surgeries (24 DBS and 19 RF-T), FAT1 based Vim-targeting was possible. For the group showing favourable outcome (71% of the patients at a median follow-up of 13 months), the mean amount of overlap between the FAT1 based Vim-target and the VTA or lesion was 42% (±13), versus 17% (±15) for patients with an unfavourable outcome (MD 25%, 95% CI 14-35, p < 0.0001). Retrospective use of FAT1 based Vim-targeting as a tool to predict outcome had a sensitivity of 90%, specificity of 80%, positive predictive value of 90%, and negative predictive value of 80%. In conclusion, FAT1 imaging is a new, high-resolution, and high-fidelity modality that combines diffusion and anatomical MRI. It provides a fast and efficacious way of targeting the ventral intermediate nucleus of the thalamus. In this study, FAT1 based targeting was highly accurate in predicting outcomes after deep brain stimulation and radiofrequency thalamotomy.
Insights
Fractional anisotropy-T1 (FAT1) imaging offers a high-resolution method for targeting the Ventral intermediate nucleus (Vim) in stereotactic surgery. This novel approach accurately predicts patient outcomes following deep brain stimulation and radiofrequency thalamotomy.
Area of Science:
- Neurosurgery
- Radiology
- Medical Imaging
Background:
- Tractography-based targeting of the Ventral intermediate nucleus (Vim) for stereotactic surgery has limitations, including subjective region of interest selection and thresholding.
- Fractional anisotropy (FA) mapping from diffusion MRI (dMRI) offers an alternative, non-tractography-based method for visualizing thalamic anatomy.
Purpose of the Study:
- To develop and evaluate a hybrid, high-resolution imaging modality (FAT1 imaging) combining FA maps and anatomical T1 sequences for Vim targeting.
- To assess the efficacy of FAT1-based Vim targeting in predicting patient outcomes after deep brain stimulation (DBS) and radiofrequency thermocoagulation (RF-T).
Main Methods:
- A retrospective analysis was performed on 35 patients undergoing 43 procedures (DBS/RF-T) between 2013 and 2021.
- FAT1 maps were created from pre-operative dMRI and MPRAGE sequences.
- An experienced neurosurgeon, blinded to patient outcomes, planned FAT1-based Vim targets. Overlap between the FAT1 target and the volume of tissue activation (VTA) or lesion volume was analyzed.
Main Results:
- FAT1-based Vim targeting was feasible in 84% of the 43 surgeries.
- Patients with favorable outcomes (71%) showed significantly greater overlap (42% ±13) between the FAT1 target and VTA/lesion compared to those with unfavorable outcomes (17% ±15).
- Retrospective FAT1 targeting demonstrated high predictive accuracy: 90% sensitivity, 80% specificity, 90% positive predictive value, and 80% negative predictive value.
Conclusions:
- FAT1 imaging is a novel, high-resolution, high-fidelity modality combining diffusion and anatomical MRI for precise Vim targeting.
- FAT1-based targeting provides a fast and effective method for planning stereotactic procedures.
- This imaging technique accurately predicts outcomes in patients undergoing DBS and RF thalamotomy for tremor.
Related Concept Videos
Magnetic Resonance Imaging
Brain Imaging
These technologies include computerized axial tomography (CAT or CT scans), positron-emission tomography (PET scans), magnetic resonance imaging (MRI), functional magnetic resonance imaging (fMRI), and Transcranial Magnetic...

