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Spatial-extent inference for testing variance components in reliability and heritability studies
Ruyi Pan1,2, Erin W Dickie2,3, Colin Hawco2,3
1Department of Statistical Sciences, University of Toronto, Toronto, Canada.
Imaging Neuroscience (Cambridge, Mass.)
|August 13, 2025
Summary
We introduce CLEAN-V, a novel statistical method for testing variance components in neuroimaging. This powerful and efficient approach enhances the detection of heritability and reliability, outperforming existing methods.
Area of Science:
- Neuroimaging
- Statistical genetics
- Brain imaging analysis
Background:
- Existing neuroimaging methods for variance component testing, crucial for heritability and reliability estimation, are limited by the General Linear Model (GLM) and suffer from low statistical power.
- Methodological and computational challenges hinder the development of powerful statistical tests for variance components in neuroimaging data.
Purpose of the Study:
- To develop a fast and powerful statistical test for variance components in neuroimaging data.
- To address the limitations of existing methods in detecting narrow-sense heritability and test-retest reliability.
- To improve statistical power in neuroimaging analyses of genetic and reliability components.
Main Methods:
- Proposed CLEAN-V (CLEAN for testing Variance components), a novel statistical test for variance components.
- Modeled global spatial dependence structure of imaging data.
- Employed data-adaptive pooling of neighborhood information for locally powerful statistics.
- Utilized permutations for family-wise error rate (FWER) control in multiple comparisons.
Main Results:
- CLEAN-V demonstrated superior performance in detecting test-retest reliability and narrow-sense heritability compared to existing methods.
- Achieved significantly improved statistical power in analyses of Human Connectome Project task-fMRI data and simulations.
- Detected areas of significance aligned with functional magnetic resonance imaging (fMRI) activation maps.
- Showcased computational efficiency, indicating practical utility.
Conclusions:
- CLEAN-V offers a significant advancement in statistical testing for variance components in neuroimaging.
- The method provides enhanced power for detecting heritability and reliability, crucial for understanding brain function and individual differences.
- CLEAN-V's computational efficiency and availability as an R package facilitate its widespread application in neuroimaging research.
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