Open-source platforms to investigate analytical flexibility in neuroimaging
Jacob Sanz-Robinson1,2, Michelle Wang1, Brent McPherson1
1NeuroDataScience-ORIGAMI Lab, McConnell Brain Imaging Centre, The Neuro (Montreal Neurological Institute-Hospital), Faculty of Medicine and Health Sciences, McGill University, Montreal, Quebec, Canada.
Brain imaging analysis tools vary, impacting study reproducibility. This review catalogs software to manage analytical flexibility and improve neuroimaging research reliability.
Area of Science:
- Neuroimaging
- Computational Neuroscience
- Brain Imaging Analysis
Background:
- Brain imaging research faces challenges with analytical flexibility, where diverse tools yield inconsistent results on the same data.
- This variability compromises the reproducibility and robustness of neuroimaging studies.
- Existing software for addressing analytical flexibility is fragmented and poorly documented, hindering researchers' ability to ensure reliable findings.
Purpose of the Study:
- To catalog and describe software platforms for managing result variability in neuroimaging.
- To explore the use of computing platforms and neuroimaging pipeline frameworks in addressing analytical flexibility.
- To provide guidance on accessing, understanding, and utilizing these platforms to enhance brain imaging research reliability.
Main Methods:
- Systematic review and cataloging of software platforms and computational libraries relevant to neuroimaging analysis.
- Exploration of computing platforms and neuroimaging pipeline frameworks.
- Analysis of documentation and accessibility of these tools.
Main Results:
- Identified and described various software platforms and computational libraries designed to address analytical variability in brain imaging.
- Highlighted the role of computing platforms and pipeline frameworks in standardizing neuroimaging workflows.
- Assessed the current state of documentation and accessibility for tools managing analytical flexibility.
Conclusions:
- Researchers need accessible, well-documented tools to manage analytical flexibility in brain imaging.
- Utilizing cataloged software platforms and pipeline frameworks can improve the reproducibility and reliability of neuroimaging studies.
- Tailored recommendations are provided for different user groups based on their computational needs and intended tools.
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