FedECA: federated external control arms for causal inference with time-to-event data in distributed settings
Jean Ogier du Terrail1, Quentin Klopfenstein2, Honghao Li2
1Owkin, Inc., New York, NY, USA. jean.duterrail.scientific.contact@gmail.com.
Abstract:
External control arms can inform early clinical development of experimental drugs and provide efficacy evidence for regulatory approval. However, accessing sufficient real-world or historical clinical trials data is challenging. Indeed, regulations protecting patients' rights by strictly controlling data processing make pooling data from multiple sources in a central server often difficult. To address these limitations, we develop a method that leverages federated learning to enable inverse probability of treatment weighting for time-to-event outcomes on separate cohorts without needing to pool data. To showcase its potential, we apply it in different settings of increasing complexity, culminating with a real-world use-case in which our method is used to compare the treatment effect of two approved chemotherapy regimens using data from three separate cohorts of patients with metastatic pancreatic cancer. By sharing our code, we hope it will foster the creation of federated research networks and thus accelerate drug development.
Insights
Federated learning enables external control arms for drug development without pooling patient data. This method uses inverse probability of treatment weighting for time-to-event outcomes across separate datasets, accelerating clinical research.
Area of Science:
- * Clinical pharmacology and drug development.
- * Biostatistics and real-world evidence generation.
- * Health data privacy and security.
Background:
- * External control arms are crucial for drug development and regulatory approval.
- * Challenges exist in accessing and pooling real-world or historical clinical trial data due to privacy regulations.
- * Centralized data aggregation is often hindered by data protection requirements.
Purpose of the Study:
- * To develop a federated learning method for inverse probability of treatment weighting (IPTW) for time-to-event outcomes.
- * To enable the use of external control arms without centralizing sensitive patient data.
- * To facilitate the comparison of treatment effects across distributed datasets.
Main Methods:
- * Implementation of federated learning to perform IPTW on decentralized patient cohorts.
- * Application of the method in simulated and real-world settings of increasing complexity.
- * Validation using data from three separate patient cohorts for metastatic pancreatic cancer.
Main Results:
- * Demonstrated the feasibility of federated learning for IPTW on time-to-event data across separate cohorts.
- * Successfully applied the method to compare chemotherapy regimens in metastatic pancreatic cancer patients.
- * Showcased the potential for robust comparative effectiveness research without data pooling.
Conclusions:
- * Federated learning offers a viable solution for utilizing external control arms in drug development.
- * The developed method addresses data privacy concerns and facilitates collaborative research.
- * This approach can accelerate the generation of real-world evidence and support regulatory decision-making.
Related Concept Videos
Causality in Epidemiology
Comparing the Survival Analysis of Two or More Groups
Model Approaches for Pharmacokinetic Data: Distributed Parameter Models
The distributed parameter models are specifically designed to account for variations and differences in some drug classes. This model is particularly useful for assessing regional concentrations of anticancer or...
Friedman Two-way Analysis of Variance by Ranks
Assumptions of Survival Analysis
Statistical Methods for Analyzing Epidemiological Data


