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Published on: June 7, 2012
Complete genome sequence of Vibrio sinus, a potential contributor to collagen degradation
Dingyong Huang1, Wanjia Tong2, Jinfeng Wang3
1Key Laboratory of Marine Ecological Conservation and Restoration /Fujian Provincial Key Laboratory of Marine Ecological Conservation and Restoration, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China; Observation and Research Station of Island and Coastal Ecosystem in the Western Taiwan Strait, Ministry of Natural Resources, Xiamen 361005, China; Fujian Provincial Station for Field Observation and Research of Island and Coastal Zone in Zhangzhou, Zhangzhou 363216, China.
Abstract:
Collagenase is an enzyme that has been shown to be highly effective in the degradation of both native triple-helical collagen and its denatured form (e.g., gelatin). As a virulence factor secreted by pathogenic bacteria (Clostridium histolyticum, Vibrio, Bacillus cereus), this efficacy is attributed to the unique ability of the enzyme to hydrolyze Gly-X-Y bonds within thermally stable fibrillar structures. A highly efficient gelatin degrading strain, Vibrio sinus S4M6T, was isolated from the surface seawater collected in Dongshan Bay (Fujian, PR China), but the key genes involved in gelatin degradation remain unknown. Here, we report the complete genome sequence of Vibrio sinus S4M6T and its collagen degrading genes. The genome of strain S4M6T consists of two circular chromosomes, with a total chromosome length of 4.78 Mbp and a GC content of 43.4 %. Genomic analysis revealed that strain S4M6T encodes a collagenase gene involved in collagen degradation. This study provides a genetic insight of collagen degradation in marine Vibrio species.
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