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An efficient and interactive feature selection approach based on copula entropy for high-dimensional genetic data.

Xiaoran Yan1, Shilong Shang2, Dongxi Li3

  • 1College of Artificial Intelligence, Taiyuan University of Technology, Taiyuan, Shanxi, China.

Scientific Reports
|August 17, 2025
PubMed
Summary
This summary is machine-generated.

We introduce CEFS+, an efficient feature selection method using copula entropy for high-dimensional data. This approach significantly improves classification accuracy, outperforming existing methods, especially on genetic datasets.

Keywords:
Copula entropyFeature selectionHigh-dimensional dataMachine learningMutual information

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Area of Science:

  • Machine Learning
  • Data Science
  • Bioinformatics

Background:

  • High-dimensional data presents challenges for machine learning models.
  • Effective feature selection is crucial for improving model performance and interpretability.
  • Existing feature selection methods may struggle with complex, high-order feature interactions.

Purpose of the Study:

  • To propose an efficient and interactive feature selection approach using copula entropy.
  • To develop a novel feature selection criterion based on the divisibility of multivariate mutual information.
  • To enhance the stability and performance of the proposed method through an improved version (CEFS+).

Main Methods:

  • Developed CEFS (Copula Entropy Feature Selection) using copula entropy to measure feature relevance and capture full-order interactions.
  • Combined feature-feature and feature-label mutual information with a max-relevance min-redundancy strategy.
  • Proposed CEFS+ incorporating a rank technique to address CEFS instability.
  • Evaluated CEFS and CEFS+ using three classifiers on five diverse datasets.

Main Results:

  • CEFS+ achieved the highest classification accuracy in 10 out of 15 evaluated scenarios.
  • The proposed methods significantly outperformed six other commonly used feature selection techniques.
  • CEFS+ demonstrated particular effectiveness on high-dimensional genetic datasets.

Conclusions:

  • Copula entropy-based feature selection offers an effective strategy for high-dimensional data.
  • CEFS+ provides a robust and accurate method for improving classification performance.
  • The approach holds promise for applications in fields like bioinformatics where high-dimensional data is prevalent.