Related Experiment Video
Updated: Sep 8, 2025

Assessing Autophagic Flux by Measuring LC3, p62, and LAMP1 Co-localization Using Multispectral Imaging Flow Cytometry
Published on: July 21, 2017
Unc-51 Like Kinase 3 (ULK3) is essential for autophagy and cell survival in multiple myeloma
Conor Lynch1, Marilena Tauro1, Tao Li2
1Department of Tumor Microenvironment & Metastasis, H. Lee Moffitt Cancer Center and Research Institute; Tampa, FL, USA.
Abstract:
Despite the availability of effective therapies such as proteasome inhibitors, multiple myeloma (MM) patients relapse with refractory disease. To identify new therapeutic targets, we assessed RNA sequencing data from CD138+ MM patient cells (n = 813) across disease stages and found that an autophagy gene signature, and particularly ULK3 expression, was strongly associated with disease progression. Functional studies revealed that ULK3 contributes to MM cell survival as part of the ULK-ATG13-FIP200 complex. We generated inhibitors (SG3-014/MA9-060) with nanomolar potency and confirmed their binding mode through co-crystallization with ULK3. In vivo, ULK3 inhibition reduced MM burden, improved survival, and protected against cancer-induced bone disease. MA9-060 also restored sensitivity to proteasome inhibitors in resistant MM cells. This synergy was validated ex vivo in patient samples, especially those with high ULK3 expression. These findings indicate a new role for ULK3-mediated autophagy in cancer and suggest that ULK3 inhibition is an effective treatment strategy for both newly diagnosed and refractory MM disease.
Insights
Targeting ULK3, a key autophagy gene, offers a new strategy for multiple myeloma (MM). Inhibiting ULK3 reduces tumor burden and restores drug sensitivity in refractory MM patients.
Area of Science:
- Oncology
- Molecular Biology
- Cellular Biology
Background:
- Multiple myeloma (MM) often relapses with refractory disease despite current therapies like proteasome inhibitors.
- Identifying novel therapeutic targets is crucial for improving patient outcomes in MM.
Purpose of the Study:
- To investigate the role of autophagy genes in multiple myeloma progression.
- To evaluate ULK3 as a potential therapeutic target for MM treatment.
Main Methods:
- RNA sequencing analysis of 813 CD138+ MM patient samples.
- Functional studies of ULK3 in MM cell survival.
- Generation and testing of ULK3 inhibitors (SG3-014/MA9-060).
- In vivo studies in mouse models and ex vivo validation in patient samples.
Main Results:
- A strong association between an autophagy gene signature, particularly ULK3 expression, and MM disease progression was identified.
- ULK3 inhibition reduced MM tumor burden, improved survival, and protected against bone disease in vivo.
- The ULK3 inhibitor MA9-060 restored sensitivity to proteasome inhibitors in resistant MM cells, with synergy validated in patient samples.
Conclusions:
- ULK3 plays a significant role in MM cell survival and disease progression through autophagy.
- ULK3 inhibition represents a promising therapeutic strategy for both newly diagnosed and refractory multiple myeloma.
- Combined ULK3 inhibition and proteasome inhibitor therapy shows potential for overcoming drug resistance in MM.
Related Concept Videos
mTOR Signaling and Cancer Progression
The mTOR pathway or the...
Abnormal Proliferation
PI3K/mTOR/AKT Signaling Pathway
Autophagy
An autophagic pathway consists of a series of signaling events activated in response to diverse stress and physiological conditions such as food deprivation,...
Autophagic Cell Death
Autophagy and Apoptosis
Autophagy can activate apoptosis. In normal conditions, the autophagy activating protein Beclin-1 and...
The Intrinsic Apoptotic Pathway

