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Published on: October 6, 2016
A unified model for Duchenne muscular dystrophy gene involvement in cancer: context-dependent tumour suppression and
Lee Machado1, Leanne Jones1,2, Sonika Divakar1
1Centre for Physical Activity and Life Sciences, University of Northampton, UK.
Abstract:
Evidence implicates the Duchenne muscular dystrophy gene (DMD) in tumorigenesis, but survival trends are inconsistent. To resolve this, we conducted a comprehensive global analysis of DMD expression and survival outcomes across 33 tumour types using bulk RNA sequencing data from The Cancer Genome Atlas. We examined the impact of total DMD, individual transcript and dystrophin-associated protein complex (DAPC) gene expression levels on overall survival using Kaplan-Meier analysis, Cox proportional hazard modelling and pathway analysis. DMD expression was significantly associated with survival in nine cancers after Bonferroni correction (α = 0.0015), with high expression linked to either improved or worsened outcomes depending on cancer type. The most abundant DMD transcript, Dp71ab, mirrored total DMD trends, distinguishing two tumour groups with opposing survival associations. Hierarchical clustering suggests these divergent effects may be linked to a subset of signalling and adhesion-related DAPC components. Our findings indicate that DMD does not act uniformly as an oncogene or tumour suppressor. Instead, we propose a context-dependent dual model whereby high DMD expression is tumour suppressive in aggressive cancers and oncogenic in less aggressive tumours.
Insights
The Duchenne muscular dystrophy gene (DMD) has a dual role in cancer, acting as a tumor suppressor in aggressive cancers and an oncogene in less aggressive ones. This context-dependent function impacts patient survival outcomes across various tumor types.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- The Duchenne muscular dystrophy gene (DMD) is implicated in cancer development, but its precise role remains unclear.
- Existing evidence on DMD's impact on cancer survival is inconsistent, necessitating further investigation.
Purpose of the Study:
- To comprehensively analyze the global impact of DMD gene expression on survival outcomes across 33 distinct cancer types.
- To elucidate the context-dependent role of DMD in tumorigenesis, differentiating between tumor suppressive and oncogenic functions.
Main Methods:
- Utilized bulk RNA sequencing data from The Cancer Genome Atlas (TCGA) for global analysis.
- Employed Kaplan-Meier analysis and Cox proportional hazard modeling to assess survival associations.
- Conducted pathway analysis and hierarchical clustering to explore underlying mechanisms.
Main Results:
- DMD expression significantly correlated with survival in nine cancer types (Bonferroni corrected, α=0.0015).
- High DMD expression was associated with improved survival in some cancers and worsened outcomes in others.
- The Duchenne muscular dystrophy gene (DMD) transcript Dp71ab mirrored total DMD trends, highlighting distinct tumor groups with opposing survival associations.
Conclusions:
- DMD does not function uniformly as an oncogene or tumor suppressor across all cancers.
- A context-dependent dual model is proposed: high DMD expression is tumor suppressive in aggressive cancers and oncogenic in less aggressive tumors.
- Divergent effects of DMD may be linked to specific dystrophin-associated protein complex (DAPC) components involved in signaling and adhesion.
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