Lipid bilayer properties govern substrate engagement and extraction by the AAA+ ATPase Msp1

Heidi L Fresenius1, Brian Acquaviva2, Deepika Gaur3

  • 1Department of Chemistry & Biochemistry, Previously at University of Toledo, Toledo, Ohio, USA.

Insights

Msp1, an ATPase, removes faulty membrane proteins from mitochondria. It recognizes substrates via hydrophobic mismatch with the lipid bilayer, with TMD extraction being the rate-limiting step in this essential protein quality control process.

Area of Science:

  • Cellular Biology
  • Biochemistry
  • Membrane Protein Biology

Background:

  • Protein quality control is vital for cellular health, involving the removal of aberrant proteins.
  • Failures in membrane protein removal are linked to diseases like cancer and neurodegeneration.
  • Msp1 (ATPases Associated with diverse cellular Activities) is an ATPase crucial for removing mistargeted proteins from the outer mitochondrial membrane.

Purpose of the Study:

  • To elucidate the mechanism by which Msp1 recognizes and extracts substrates from the outer mitochondrial membrane.
  • To investigate the impact of the lipid bilayer environment on Msp1-mediated membrane protein extraction.

Main Methods:

  • Development of a novel, quantitative, and rapid in vitro assay for Msp1 extraction.
  • Systematic modification of model substrates and the lipid environment to test Msp1 activity.
  • Analysis of substrate recognition and extraction kinetics.

Main Results:

  • Msp1 recognizes substrates based on a hydrophobic mismatch between the substrate's transmembrane domain (TMD) and the surrounding lipid bilayer.
  • The rate-limiting step in Msp1's function is the extraction of the substrate's TMD from the lipid bilayer.
  • The developed assay maintains physiological substrate selectivity.

Conclusions:

  • The lipid bilayer composition significantly influences AAA+ ATPase-mediated membrane protein extraction.
  • Hydrophobic mismatch is a key recognition mechanism for Msp1.
  • This study provides fundamental insights into Msp1 function and AAA+ ATPase mechanisms in membrane protein quality control.

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