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Updated: Sep 10, 2025

Evaluation of Substrate Ubiquitylation by E3 Ubiquitin-ligase in Mammalian Cell Lysates
Published on: May 10, 2022
Targeting ubiquitin-specific peptidase 22 (USP22) as a nexus for drug repurposing in anticancer therapeutic
Saad Ali Alshehri1, Abdulrhman Alsayari1, Mohammad Abohassan2
1Department of Pharmacognosy, College of Pharmacy, King Khalid University, Abha, Saudi Arabia.
Abstract:
Ubiquitin-specific peptidase 22 (USP22) has emerged as a promising target in cancer research because of its pivotal role in tumor progression, metastasis, and therapy resistance. USP22 is frequently overexpressed in multiple malignancies and facilitates essential cellular processes, including DNA repair, cell cycle regulation, and cancer stem cell (CSC) maintenance. The strength of these attributes makes it an attractive candidate for therapeutic intervention. Despite the advances in conventional cancer treatment, recurrent and resistant USP22-overexpressing tumors demand novel treatment strategies. Drug repurposing is a cost-effective and efficient approach to overcome this challenge by taking advantage of FDA-approved drugs, wherein the safety profiles of used drugs are known for different therapeutic uses. To identify potential repurposed USP22 inhibitors, this study used an integrated computational workflow consisting of molecular docking and molecular dynamics (MD) simulations. The virtual screening of FDA-approved compounds from DrugBank revealed that Ergotamine showed high binding affinities and specific interactions with the USP22 binding pocket. Pharmacokinetic evaluations demonstrate that Ergotamine has an appropriate drug profile and biological activities in anticancer interventions. The stability and conformational dynamics of the USP22-Ergotamine complex were investigated by all-atom MD simulations for 300 ns. The robustness of these interactions was verified in these simulations and MM/PBSA, and insights into the molecular mechanisms that underlie their ability to inhibit USP22 were provided. Our findings reveal a potentially promising role for Ergotamine as a repurposed USP22 inhibitor that would be worthwhile to validate experimentally for therapeutic development against cancer.
Insights
This study identifies Ergotamine as a potential repurposed drug to inhibit USP22, a key target in cancer progression and therapy resistance. Further experimental validation is recommended for developing novel cancer treatments.
Area of Science:
- Oncology
- Computational Chemistry
- Drug Discovery
Background:
- Ubiquitin-specific peptidase 22 (USP22) is frequently overexpressed in various cancers, driving tumor progression, metastasis, and therapy resistance.
- USP22 plays a critical role in essential cellular processes like DNA repair, cell cycle regulation, and cancer stem cell maintenance.
- Novel therapeutic strategies are needed for recurrent and resistant USP22-overexpressing tumors, making drug repurposing an attractive approach.
Purpose of the Study:
- To identify FDA-approved drugs that can be repurposed as inhibitors of USP22.
- To computationally screen for compounds with high binding affinity and specific interactions with the USP22 binding pocket.
Main Methods:
- An integrated computational workflow combining molecular docking and molecular dynamics (MD) simulations was employed.
- Virtual screening of FDA-approved compounds from DrugBank was performed.
- All-atom MD simulations (300 ns) and MM/PBSA calculations were used to assess the stability and binding interactions of identified compounds.
Main Results:
- Ergotamine demonstrated high binding affinity and specific interactions within the USP22 binding pocket.
- Pharmacokinetic evaluations indicated that Ergotamine possesses a suitable drug profile for anticancer interventions.
- MD simulations and MM/PBSA analysis confirmed the stability and robustness of the USP22-Ergotamine complex, providing insights into the inhibition mechanism.
Conclusions:
- Ergotamine shows significant potential as a repurposed USP22 inhibitor.
- Experimental validation of Ergotamine's efficacy is warranted for its development as a novel cancer therapeutic.
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