Related Experiment Video
Updated: Sep 10, 2025

Finite Element Modelling of a Cellular Electric Microenvironment
Published on: May 18, 2021
Efficient Free Energies from a Simplified Electrostatic Embedding QM/MM Approach Based on Electrostatic Potential
Simone Bonfrate1, Nicolas Ferré1, Miquel Huix-Rotllant1
1Aix Marseille Univ, CNRS, ICR, Marseille 13013, France.
Abstract:
Periodic boundary condition (PBC)-adapted formulations of quantum mechanics/molecular mechanics (QM/MM) methods allow for the accurate computation of free energies, provided there is sufficient phase-space sampling. In this work, we develop a robust and efficient QM/MM approach based on electrostatic potential fitted (ESPF) charge operators. The method combines smooth particle-mesh Ewald summation to describe QM-MM electrostatic interactions and the Ewald pair potential to treat long-range QM-QM interactions. It is fully compatible with both ab initio DFT and semiempirical DFTB QM/MM frameworks under PBC. We demonstrate the efficiency of the approach by implementing a thermodynamic integration (TI) scheme to compute solvation free energies and redox potentials in condensed-phase systems. For solvation energies, we introduce two separate coupling parameters to independently decouple electrostatic and van der Waals interactions. For redox potentials, a coupling parameter is introduced directly into the density matrix, interpolating between the N- and N ± 1-electron states via fractional occupations. We apply this framework to compute solvation free energies and redox potentials in water for a set of amino acid analogues and aromatic ketones, obtaining results in qualitative agreement with experimental data. This work paves the way for routine free energy calculations using electrostatic embedding QM/MM methodologies.
More Related Videos
08:04Excitonic Hamiltonians for Calculating Optical Absorption Spectra and Optoelectronic Properties of Molecular Aggregates and Solids
Published on: May 27, 2020
05:51Isotopic Effect in Double Proton Transfer Process of Porphycene Investigated by Enhanced QM/MM Method
Published on: July 19, 2019
Related Concept Videos
Calculating Standard Free Energy Changes
Calculations of Electric Potential II
Consider a...
The Nernst Equation
The interconnection between standard cell potentials and various thermodynamic parameters such as the standard free energy change ΔG° and equilibrium constant K has been previously explored. For example, a redox reaction involving zinc(II) and tin(II) ions at 1 M concentration with Eºcell = +0.291 V and ΔG° = −56.2 kJ is spontaneous.
Energy Associated With a Charge Distribution
Gauss's Law: Problem-Solving
Coulomb's Law
Newton's third law applies to the Coulomb force — the...