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Updated: Sep 10, 2025

Oral Biofilm Sampling for Microbiome Analysis in Healthy Children
Published on: December 31, 2017
Profiling the Bacterial Microbiome Across Peri-Implant Conditions
Joaquin Espinoza-Arrue1, Marion Arce1,2,3, Natalia Endo1
1Laboratory of Oral Microbiology and Immunology, Faculty of Dentistry, University of Chile, Santiago, Chile.
The peri-implant microbiome differs significantly across health, mucositis, and peri-implantitis conditions. Peri-implantitis shows increased bacterial diversity and dysbiosis, driven by specific pathogenic species.
Area of Science:
- Oral microbiology
- Periodontology
- Microbiome research
Background:
- The bacterial microbiome plays a critical role in maintaining peri-implant health.
- Alterations in the peri-implant microbiome are associated with inflammatory conditions like peri-implant mucositis and peri-implantitis.
Purpose of the Study:
- To comprehensively characterize the bacterial microbiome in peri-implant health, peri-implant mucositis, and peri-implantitis.
- To identify key bacterial species and functional pathways associated with these conditions.
Main Methods:
- Re-analysis of 16S rRNA sequencing data from 15 studies (522 samples).
- Pre-processing using mothur, classification with HOMD database.
- Analysis of diversity, relative abundance, discriminant features (LEfSe), functional potential (PICRUSt2), co-occurrence networks, and dysbiosis index.
Main Results:
- Peri-implantitis exhibited higher bacterial diversity and richness compared to health and peri-mucositis.
- Distinct community structures and co-occurrence networks were observed for each condition.
- Key species identified: Rothia spp. and Veillonella parvula_dispar (health); Leptotrichia spp. and Fusobacterium nucleatum subsp. polymorphum (mucositis); Porphyromonas gingivalis, F. nucleatum subsp. vincentii, and Tannerella forsythia (peri-implantitis).
- Peri-implantitis showed enrichment in predicted pathogenic pathways and greater bacterial dysbiosis.
Conclusions:
- The peri-implant microbiome composition and function differ significantly across health, mucositis, and peri-implantitis.
- Specific bacterial species and dysbiotic microbial communities are strongly associated with peri-implantitis.
- These findings offer insights into the microbial drivers of peri-implant inflammation and destruction.
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