Spectral phasor imaging on a commercial confocal microscope without a spectral detector.
Elisa Longo1, Angelita Costantino2,3,4, Alessio Andreoni5
1Department of Physics and Astronomy "Ettore Majorana", University of Catania, Via S. Sofia, 64-95123, Catania, Italy.
Scientific Reports
|August 26, 2025
Summary
This study introduces a new spectral imaging method for confocal microscopes, enhancing speed and photon efficiency for live cell imaging. The 4-channel spectral phasor analysis allows detailed spectral unmixing and identification of fluorescent species.
Area of Science:
- Biophysics
- Microscopy
- Spectroscopy
Background:
- Spectral imaging is crucial for analyzing fluorescent probes and identifying species.
- Traditional lambda scan mode in confocal microscopes suffers from poor temporal resolution and photon inefficiency, limiting live sample analysis.
- There is a need for improved spectral imaging techniques compatible with standard confocal microscopes.
Purpose of the Study:
- To develop and validate a novel spectral imaging method using simultaneous 4-channel acquisition and spectral phasor analysis.
- To demonstrate the method's improved performance over lambda scan mode in terms of temporal resolution and photon efficiency.
- To showcase the application of this method for analyzing environment-sensitive probes, spectral unmixing, and multicolor imaging in live biological samples.
Main Methods:
- Implementation of a 4-channel simultaneous image acquisition system on a commercial confocal laser scanning microscope.
- Application of spectral phasor analysis to the acquired 4-channel data for spectral characterization.
- Utilizing environment-sensitive dyes (ACDAN, Nile Red) and fluorescent proteins (mEmerald, EYFP) for method validation.
- Performing spectral unmixing and multicolor imaging in live cells and organoids.
Main Results:
- The 4-channel spectral phasor method offers superior photon efficiency and temporal resolution compared to lambda scan mode.
- The technique can discern spectral emission changes as small as 5 nm between subcellular compartments.
- Successfully decomposed Nile Red signals into two components and enabled 3-color imaging in live organoids.
- Demonstrated effective unmixing of overlapping emission spectra from fluorescent proteins like mEmerald and EYFP.
Conclusions:
- The 4-channel spectral phasor analysis is a viable and efficient spectral imaging technique for standard confocal microscopes.
- This method significantly advances the study of live biological systems by enabling high-resolution spectral analysis and multicolor imaging.
- The technique provides a powerful tool for spectral unmixing and identifying fluorescent species with overlapping spectra.
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