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Related Concept Videos

Reporter Genes02:11

Reporter Genes

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Reporter genes are a type of protein-coding gene that are often tagged to a gene of interest. Once inside a target cell, reporter genes usually produce visually identifiable characteristics like fluorescence and luminescence when expressed along with the gene of interest. Thus, reporter genes “report” the presence or absence of genes of interest in an organism, determine the gene expression pattern, or track the physical location of a DNA segment or protein in the cell.
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Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
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Riboswitches are RNA elements that regulate gene expression by altering their secondary structures in response to specific effector molecules. These elements, located in the leader regions of certain mRNAs, act as transcriptional regulators by toggling between alternative conformations to control downstream gene expression. Riboswitch-mediated regulation is a precise mechanism for modulating biosynthetic pathways, as exemplified by the riboflavin biosynthesis pathway in Bacillus...
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The DNA replication, transcription, and translation processes are intricately coupled in bacteria, allowing efficient gene expression and rapid protein synthesis. While this physical and functional coordination is advantageous, it introduces challenges that bacteria overcome through specific regulatory mechanisms.Coupling of Replication, Transcription, and TranslationThe coupling of replication, transcription, and translation is a hallmark of bacterial gene expression. As the replisome unwinds...
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Constitutive and Regulated Gene Expression

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Gene expression in prokaryotes is governed by constitutive and regulated systems, allowing cells to balance the production of essential proteins with adaptive responses to environmental changes.Constitutive Gene ExpressionConstitutive, or housekeeping, genes are continuously expressed as they encode proteins vital for fundamental cellular processes. These include enzymes for glycolysis, ribosomal components for protein synthesis, and proteins involved in DNA replication. Their constant...
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BioFuse: A programmable timer switch of gene expression.

Cheng Huang1, Jie Zhao1, Zichun Tan1

  • 1Institute of Biophysics, College of Life Sciences, Zhejiang University, Hangzhou, China.

Science Advances
|August 27, 2025
PubMed
Summary
This summary is machine-generated.

We developed BioFuse, a programmable gene expression timer switch with reaction times from hours to days. This synthetic biology tool precisely controls gene activity for applications in metabolic engineering and biomedicine.

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Area of Science:

  • Synthetic biology
  • Genetic engineering
  • Molecular biology

Background:

  • Existing gene expression timing systems have limited temporal tunability due to complex regulator interactions.
  • Precise control over gene expression timing is crucial for various biotechnological applications.

Purpose of the Study:

  • To develop a novel, programmable gene expression timer switch with a wide range of temporal tunability.
  • To demonstrate the utility of this timer in controlling metabolic pathways and biological processes.

Main Methods:

  • Designed BioFuse, a synthetic gene circuit utilizing sequential DNA cassette editing by adenine base editors (ABEs).
  • Programmed reaction times by adjusting the number of DNA cassettes.
  • Applied BioFuse to control carotenoid biosynthesis genes in E. coli and a bacterial autolysis system.

Main Results:

  • BioFuse enables programmable gene expression timing ranging from hours to days.
  • Controlled lycopene production in E. coli, decoupling it from growth and increasing yield.
  • Facilitated timely and efficient protein release in a bacterial autolysis system.

Conclusions:

  • BioFuse provides a versatile tool for precise, wide-range temporal control of gene expression and metabolic activities in bacteria.
  • This technology has potential applications in industrial biotechnology and biomedicine.