Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Data Reporting and Recording01:24

Data Reporting and Recording

5.5K
Reporting and recording are crucial in data documentation. The timely, thorough, and accurate documentation of facts is essential when recording patient data. Failure to record findings during an assessment or interpretation of a problem will result in loss of information and make the patient document unreliable. The reader is left with general impressions if the information is not specific. A recording is documenting data of the individual's health information in a traceable, secure, and...
5.5K
Types of Reports I: Hand-off Report01:25

Types of Reports I: Hand-off Report

1.5K
A hand-off report, also known as a change-of-shift report, is a crucial nursing process that ensures the smooth transition of patient care responsibilities between nursing staff.
Following are the key components and categories of hand-off reports:
Purpose and Process:
1.5K
Distribution Reliability and Automation01:25

Distribution Reliability and Automation

678
Distribution reliability in electrical power systems is critical for ensuring an uninterrupted power supply to consumers at minimal cost. According to IEEE Standard Terms, reliability is the probability that a device will function without failure over a specified time period or amount of usage. For electric power distribution, this translates to maintaining continuous power supply and addressing customer concerns over power outages. Several indices, as defined by IEEE Standard 1366-2012, are...
678
Performing a Simple Data Analysis using MS-Excel Function01:17

Performing a Simple Data Analysis using MS-Excel Function

1.1K
Microsoft Excel offers a suite of functions and tools ideal for statistical analysis, making it accessible to students and researchers. This article outlines fundamental Excel functions pivotal for data analysis.
SUM: This function calculates the total sum of a range of values. It's the foundation for aggregating data, essential for determining overall trends and totals in datasets.
AVERAGE: It computes the mean value of a given set of numbers, providing a quick insight into the central...
1.1K
Run Charts01:12

Run Charts

404
Run charts serve as an essential instrument for visualizing the performance of various processes over time, enabling the identification of trends and patterns crucial for quality improvement. These charts map out a series of data points chronologically, offering insights into the stability and efficiency of a process. A run chart's creation involves plotting data points on a graph, with the time intervals on the horizontal axis and the specific measurements on the vertical axis. For...
404
Increasing Function01:18

Increasing Function

513
An increasing function exhibits a rise in output values as input values increase. This behavior is depicted graphically as a curve or line that slopes upward from left to right. Such a function satisfies the condition that if x1 < x2, then f(x1) < f(x2), indicating that the function values grow with increasing inputs. This concept is fundamental in understanding growth trends across various domains, such as population dynamics, financial investments, or resource consumption.The...
513

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Premature Failure of Galvanized Fire Sprinkler Pipes in Coastal Conditions: Evidence of Sequential Atmospheric and Aqueous Corrosion.

Materials (Basel, Switzerland)·2026
Same author

Unintended Creation or Insertion of Antisense Promoter Motifs During Codon Optimization: A Cyber-Biosecurity Risk.

Microorganisms·2026
Same author

Differential coping strategies exerted by biofilm and planktonic cells of <i>Bacillus subtilis</i> in response to a protozoan predator.

Microbiology spectrum·2025
Same author

Distinct Clinical Phenotypes in Lactase Nonpersistence: Symptomatic, Asymptomatic, and Gassy-Asymptomatic.

The American journal of gastroenterology·2025
Same author

The ladder of regulatory stringency and balance: an application to the US FDA's regulation of bacterial live therapeutics.

Gut microbes·2025
Same author

The Utilization of <i>Bacillus subtilis</i> to Design Environmentally Friendly Living Paints with Anti-Mold Properties.

Microorganisms·2024

Related Experiment Video

Updated: May 5, 2026

A Versatile Automated Platform for Micro-scale Cell Stimulation Experiments
12:21

A Versatile Automated Platform for Micro-scale Cell Stimulation Experiments

Published on: August 6, 2013

10.7K

Automated Platform for the Analysis of Multi-Plate Growth and Reporter Data.

Avichay Nahami1,2, Dor Kain2, Yonatan Cohen1,3

  • 1Faculty of Electrical and Electronics Engineering, HIT-Holon Institute of Technology, Holon 5810201, Israel.

Microorganisms
|August 28, 2025
PubMed
Summary

This study introduces optimized scripts and a user-friendly platform for analyzing multi-plate microbial growth and gene expression data. It integrates optical density, luminescence, and fluorescence measurements from automated systems, overcoming software limitations.

Keywords:
automationbacteriologydata visualizationgrowthreporters

More Related Videos

Multi-scale Analysis of Bacterial Growth Under Stress Treatments
12:08

Multi-scale Analysis of Bacterial Growth Under Stress Treatments

Published on: November 28, 2019

9.6K
High-Throughput Live Imaging of Microcolonies to Measure Heterogeneity in Growth and Gene Expression
12:52

High-Throughput Live Imaging of Microcolonies to Measure Heterogeneity in Growth and Gene Expression

Published on: April 18, 2021

4.9K

Related Experiment Videos

Last Updated: May 5, 2026

A Versatile Automated Platform for Micro-scale Cell Stimulation Experiments
12:21

A Versatile Automated Platform for Micro-scale Cell Stimulation Experiments

Published on: August 6, 2013

10.7K
Multi-scale Analysis of Bacterial Growth Under Stress Treatments
12:08

Multi-scale Analysis of Bacterial Growth Under Stress Treatments

Published on: November 28, 2019

9.6K
High-Throughput Live Imaging of Microcolonies to Measure Heterogeneity in Growth and Gene Expression
12:52

High-Throughput Live Imaging of Microcolonies to Measure Heterogeneity in Growth and Gene Expression

Published on: April 18, 2021

4.9K

Area of Science:

  • Microbiology
  • Molecular Biology
  • Biotechnology

Background:

  • Traditional growth rate calculations rely on optical density (OD) logarithms, with existing scripts.
  • Automated plate readers enhance data collection for OD, luminescence, and fluorescence, aiding gene expression studies.
  • Current software faces challenges integrating data from robotic multi-plate systems, hindering combined growth and reporter analyses.

Purpose of the Study:

  • To address the incompatibility of robotic multi-plate systems with existing analysis software.
  • To integrate microbial growth and reporter gene expression analyses.
  • To develop user-friendly interfaces for non-programmers analyzing high-throughput screening data.

Main Methods:

  • Development of optimized script packages for data analysis.
  • Integration of optical density, luminescence, and fluorescence data streams.
  • Implementation of a case study focusing on matrix gene expression in response to antibiotics.

Main Results:

  • Successful integration of growth and reporter analyses from multi-plate robotic systems.
  • Demonstration of efficient and combined analysis of high-throughput screening data.
  • Provision of a user-friendly platform for researchers without extensive programming experience.

Conclusions:

  • The developed platform facilitates efficient and integrated analysis of multi-plate growth and reporter data.
  • Overcomes limitations of current software in handling data from automated laboratory systems.
  • Enables deeper insights into biological processes through combined growth and gene expression measurements.