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Whole Genome Sequencing of Candida glabrata for Detection of Markers of Antifungal Drug Resistance
Published on: December 28, 2017
Candidemia: An Update on Epidemiology, Risk Factors, Diagnosis, Susceptibility, and Treatment
Juan Pablo Cabrera-Guerrero1,2, Eduardo García-Salazar3, Graciela Hernandez Silva4
1Servicio de Microbiología, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas (INER), Calz. de Tlalpan 4502, Belisario Domínguez Secc 16, Tlalpan, Mexico City 14080, Mexico.
Abstract:
Candidemia is a highly prevalent invasive fungal infection caused primarily by C. albicans, C. parapsilosis, C. glabrata (currently Nakaseomyces glabratus), C. tropicalis, and C. krusei (currently Pichia kudriavzevii). Risk factors for the development of candidemia include steroid-induced immunosuppression used in solid organ or hematopoietic transplantation, and neutropenia secondary to infectious or tumorous processes. Alterations in the gut microbiota in people living with HIV, caused by antiretroviral therapy, increase the possibility of colonization by C. albicans. Likewise, the presence of a central venous catheter, parenteral nutrition, and abdominal surgery stand out as the main risk factors for the development of candidemia. New diagnostic tools have been developed for the diagnosis of this mycosis that allow the identification of the main species, from improvements in conventional stains such as calcofluor white, which increases sensitivity, as well as technologies such as T2 Candida, MoiM assay, biomarker panel (1,3 β-D-glucan, C-reactive protein, presepsin, and procalcitonin), and, more recently, the development of biosensors for the identification of Candida spp. Regarding treatment, the use of micafungin and anidulafungin in patients with obesity defined by a BMI > 30 kg/m2 has shown higher survival rates and therapeutic success. Meanwhile, newer antifungals such as rezafungin and fosmanogepix have demonstrated excellent results in the treatment of these patients. Therefore, this review aims to update the epidemiology and risk factors of candidemia, as well as analyze the diagnostic tools and treatments currently available.
Insights
Candidemia, a common fungal infection, is linked to immunosuppression and medical devices. Newer diagnostics and antifungals like rezafungin offer improved treatment for invasive candidiasis.
Area of Science:
- Medical Mycology
- Infectious Diseases
- Clinical Microbiology
Background:
- Candidemia is a prevalent invasive fungal infection, primarily caused by *Candida* species.
- Risk factors include immunosuppression, central venous catheters, and alterations in gut microbiota.
Purpose of the Study:
- To provide an updated review of candidemia epidemiology and risk factors.
- To analyze current diagnostic tools and available treatments for candidemia.
Main Methods:
- Review of current literature on candidemia.
- Analysis of diagnostic technologies including conventional stains, T2 Candida, MoiM assay, biomarker panels, and biosensors.
- Evaluation of treatment outcomes with echinocandins, rezafungin, and fosmanogepix, particularly in obese patients.
Main Results:
- Established risk factors for candidemia are reviewed.
- Novel diagnostic methods enhance the identification of *Candida* species.
- Specific antifungals demonstrate improved outcomes in patient populations, including those with obesity.
Conclusions:
- Updated understanding of candidemia risk factors is crucial.
- Advancements in diagnostics and therapeutics are improving patient outcomes.
- Targeted antifungal strategies show promise for invasive candidiasis treatment.
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