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Response to Antiangiogenic Therapy Is Associated with AIMP Protein Family Expression in Glioblastoma and Lower-Grade
Humaira Noor1, Yuanning Zheng1, Haruka Itakura2
1Stanford Center for Biomedical Informatics Research, Department of Medicine, Stanford University School of Medicine, Stanford, California.
Abstract:
Glioblastoma (GBM) is a highly vascularized, heterogeneous tumor, yet antiangiogenic therapies have yielded limited survival benefits. The lack of validated predictive biomarkers for treatment response stratification remains a major challenge. Aminoacyl tRNA synthetase complex-interacting multicomplex proteins (AIMP) 1/2/3 have been implicated in central nervous system diseases, but their roles in gliomas remain unexplored. We investigated their association with angiogenesis and their significance as predictive biomarkers for antiangiogenic treatment response. In this multi-cohort retrospective study, we analyzed glioma samples from The Cancer Genome Atlas, Chinese Glioma Genome Atlas, REMBRANDT, Gravendeel, BELOB, and REGOMA trials, and four single-cell transcriptomic datasets. Multiomic analyses incorporated transcriptomic, epigenetic, and proteomic data. Kaplan-Meier and Cox proportional hazards models were used to assess the potential prognostic value of AIMPs in heterogeneous and homogeneous treatment groups. Using single-cell transcriptomics, we explored spatial and cell type-specific AIMP2 expression in GBM. AIMP1/2/3 expressions correlated significantly with angiogenesis across The Cancer Genome Atlas cancers. In gliomas, AIMPs were upregulated in tumor versus normal tissues, higher- versus lower-grade gliomas, and recurrent versus primary tumors (P < 0.05). Upon retrospective analysis of two clinical trials assessing different antiangiogenic drugs, we found that high-AIMP2 subgroups had improved response to therapies in GBM [REGOMA: HR, 4.75 (1.96-11.5), P < 0.001; BELOB: HR, 2.3 (1.17-4.49), P = 0.015]. AIMP2-cg04317940methylation emerged as a clinically applicable stratification marker. Single-cell analysis revealed homogeneous AIMP2 expression in tumor tissues, particularly in astrocyte-like cells, suggesting a mechanistic link to tumor angiogenesis. These findings provide novel insights into the role of AIMPs in angiogenesis, offering improved patient stratification and therapeutic outcomes in recurrent GBM.
Significance:
This study identifies AIMP2 as a novel biomarker predictive of antiangiogenic treatment response in recurrent GBM. Through multiomic and single-cell analyses, AIMP2 is shown to be upregulated in aggressive gliomas and linked to angiogenesis. Its expression and methylation status offer a clinically applicable stratification tool, enabling more personalized therapeutic approaches and improved outcomes in patients receiving antiangiogenic therapies.
Insights
Aminoacyl tRNA synthetase complex-interacting multicomplex proteins (AIMPs) show promise as predictive biomarkers for anti-angiogenic therapy in glioblastoma. High AIMP2 expression correlates with better treatment response, aiding patient stratification for improved outcomes.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Glioblastoma (GBM) is a highly vascularized tumor where anti-angiogenic therapies show limited efficacy.
- Predictive biomarkers are crucial for stratifying GBM patients for targeted treatments.
- The role of Aminoacyl tRNA synthetase complex-interacting multicomplex proteins (AIMPs) 1/2/3 in gliomas and their association with angiogenesis is unexplored.
Purpose of the Study:
- To investigate the association of AIMPs 1/2/3 with angiogenesis in gliomas.
- To evaluate AIMPs as predictive biomarkers for anti-angiogenic treatment response in GBM.
- To explore the spatial and cell-type-specific expression of AIMP2 in GBM.
Main Methods:
- Multi-cohort retrospective analysis of glioma samples (TCGA, CGGA, Rembrandt, Gravendeel, BELOB, REGOMA) and single-cell transcriptomic data.
- Multi-omic analyses including transcriptomic, epigenetic, and proteomic data.
- Kaplan-Meier and Cox proportional hazards models for prognostic value assessment; single-cell transcriptomics for spatial expression analysis.
Main Results:
- AIMP1/2/3 expression correlated with angiogenesis across TCGA cancers and were upregulated in gliomas compared to normal tissues, higher-grade vs. lower-grade, and recurrent vs. primary tumors.
- High AIMP2 subgroups demonstrated improved response to anti-angiogenic therapies in GBM clinical trials (REGOMA, BELOB).
- AIMP2-cg04317940 methylation was identified as a clinically applicable stratification marker, with homogeneous AIMP2 expression in tumor tissues, particularly AC-like cells.
Conclusions:
- AIMPs play a significant role in glioma angiogenesis.
- AIMP2 and its methylation status can serve as predictive biomarkers for anti-angiogenic therapy response in GBM.
- These findings support improved patient stratification and therapeutic strategies for recurrent GBM.
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