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Published on: February 20, 2019
Integrative machine learning and Mendelian randomization identify causal laboratory biomarkers for coronary artery
Hancao Yang1, Meng Wu2, Keqing Liang1
1Department of Clinical Laboratory, Children's Hospital of Fudan University & National Children Medical Center, Shanghai, China.
Insights
Artificial intelligence models can predict coronary artery lesion (CAL) risk in children with Kawasaki disease (KD). This approach, validated with genetic analysis, aids early intervention for CALs in KD patients.
Area of Science:
- Pediatric Cardiology
- Artificial Intelligence in Medicine
- Genetics
Background:
- Kawasaki disease (KD) poses a significant risk of coronary artery lesions (CALs) in children.
- Early identification of high-risk patients is crucial for timely intervention and improved outcomes.
Purpose of the Study:
- To develop and validate an artificial intelligence (AI) model for predicting CAL risk in KD patients.
- To identify key predictive features and their causal associations with CALs.
Main Methods:
- Utilized machine learning (ML) models, including Multi-Layer Perceptron Classifier (MLPC), Random Forest (RF), and Extra Tree (ET), on data from 506 KD patients.
- Performed time-across validation and Mendelian randomization (MR) analysis to assess model performance and genetic causality.
- Identified seven predictive features for model development.
Main Results:
- MLPC demonstrated the highest accuracy among the validated ML models.
- Activated partial thromboplastin time (APTT) and red cell distribution width (RDW) were identified as causal factors associated with CALs.
- The AI model, supported by genetic validation, offers reliable risk stratification.
Conclusions:
- AI-based prediction models, integrated with genetic insights from MR, provide a robust method for early CAL risk assessment in KD.
- This strategy can facilitate prompt clinical management and potentially reduce the incidence of severe complications.
Abstract:
Kawasaki disease (KD) patients could develop coronary artery lesions (CALs) which threatens children's life. We aimed to develop and validate an artificial intelligence model that can predict CALs risk in KD patients. A total of 506 KD patients were included at Children's Hospital of Fudan University. Seven predictive features were identified for model building. Among different machine learning (ML) models tested, Multi-Layer Perceptron Classifier (MLPC), Random Forest (RF) and Extra Tree (ET) demonstrated optimal performance. These were finally chosen for time-across validation. Among three of them, MLPC stands out with its highest accuracy. Besides, Mendelian randomization (MR) analysis also provided genetic evidence. Among seven predictive features, two of them were identified as causal associations with CALs. They are activated partial thromboplastin time (APTT) and red cell distribution width (RDW). The causal mechanism reinforced the biological plausibility of the model. ML-based prediction models, combined with genetic validation through MR, offer a reliable approach for early CALs risk stratification in KD patients. This strategy may facilitate timely clinical interventions.
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