Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Improving Translational Accuracy02:07

Improving Translational Accuracy

11.8K
Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...
11.8K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Experimenter-free pain assessment in mice using a thermal gradient ring and functional linear models.

Pain reports·2026
Same author

Characterizing Universal Object Representations Across Vision Models.

ArXiv·2026
Same author

Fast penalized generalized estimating equations for large longitudinal functional datasets.

Biometrics·2026
Same author

In-scanner thoughts contribute to resting-state functional connectivity.

Nature communications·2026
Same author

Brain age prediction in generalized anxiety disorder using a convolutional neural network.

Translational psychiatry·2026
Same author

Robust but independent sex differences in human brain function, structure, and behavior.

Nature communications·2026

Related Experiment Video

Updated: Sep 9, 2025

Author Spotlight: Advancing Alzheimer's Research – Exploring Early Detection and Multi-Omics Approaches
09:47

Author Spotlight: Advancing Alzheimer's Research – Exploring Early Detection and Multi-Omics Approaches

Published on: December 15, 2023

1.2K

Improving the Interpretability of fMRI Decoding using Deep Neural Networks and Adversarial Robustness.

Patrick McClure1, Dustin Moraczewski2, Ka Chun Lam1

  • 1Machine Learning Team, Functional Magnetic Resonance Imaging Facility, National Institute of Mental Health, Bethesda, MD, 20892, USA.

Aperture Neuro
|September 2, 2025
PubMed
Summary

Deep neural networks (DNNs) are often uninterpretable. This study introduces new methods for creating reliable saliency maps to understand DNN predictions, particularly in neuroscience, showing adversarial training improves interpretability.

More Related Videos

A Novel Experimental and Analytical Approach to the Multimodal Neural Decoding of Intent During Social Interaction in Freely-behaving Human Infants
11:14

A Novel Experimental and Analytical Approach to the Multimodal Neural Decoding of Intent During Social Interaction in Freely-behaving Human Infants

Published on: October 4, 2015

11.0K

Related Experiment Videos

Last Updated: Sep 9, 2025

Author Spotlight: Advancing Alzheimer's Research – Exploring Early Detection and Multi-Omics Approaches
09:47

Author Spotlight: Advancing Alzheimer's Research – Exploring Early Detection and Multi-Omics Approaches

Published on: December 15, 2023

1.2K
A Novel Experimental and Analytical Approach to the Multimodal Neural Decoding of Intent During Social Interaction in Freely-behaving Human Infants
11:14

A Novel Experimental and Analytical Approach to the Multimodal Neural Decoding of Intent During Social Interaction in Freely-behaving Human Infants

Published on: October 4, 2015

11.0K

Area of Science:

  • Neuroscience
  • Machine Learning
  • Data Science

Background:

  • Deep neural networks (DNNs) are powerful tools for analyzing complex, high-dimensional data but are often considered "black boxes" due to their lack of interpretability.
  • Understanding which input features drive DNN predictions is crucial for applications in cognitive neuroscience and neuroinformatics.
  • Saliency maps are commonly used to visualize input feature importance, but existing methods can be unreliable, sensitive to noise, and difficult to evaluate.

Purpose of the Study:

  • To review gradient-based saliency map methods for DNNs.
  • To introduce a novel adversarial training method to enhance DNN robustness to input noise and improve interpretability.
  • To propose and validate quantitative evaluation procedures for saliency map interpretability in neuroimaging data.

Main Methods:

  • A review of existing gradient-based saliency map techniques.
  • Development of an adversarial training approach for noise-robust DNNs.
  • Introduction of two quantitative evaluation procedures for saliency maps, tested on synthetic data and functional magnetic resonance imaging (fMRI) data from the Human Connectome Project (HCP).

Main Results:

  • Saliency maps generated by different methods exhibit significant variability in interpretability.
  • Despite comparable decoding performance, DNN-derived saliency maps showed higher interpretability than those from linear models.
  • The proposed adversarial training method resulted in saliency maps that outperformed alternative methods in interpretability.

Conclusions:

  • The interpretability of saliency maps varies widely across different methods and model types.
  • Adversarial training offers a promising approach to enhance the interpretability of DNNs in neuroimaging.
  • The developed evaluation procedures provide a robust framework for assessing saliency map quality in decoding tasks.