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3D Spatial Learning for Adsorption Energy Prediction in Multi-Temporal Solution Systems: The MTSS Data Set and a
Lanqi Li1, Rui Luo2, Xiaolu Chen2
1Henan Institute of Advanced Technology, Zhengzhou University, Zhengzhou 450001, People's Republic of China.
Journal of Chemical Information and Modeling
|September 3, 2025
Summary
This study introduces a new dataset and a deep learning model, SEP-Net, for predicting adsorption energy in dynamic solution systems. SEP-Net accurately models complex solute-solvent interactions, improving prediction accuracy for adsorption processes.
Area of Science:
- Computational chemistry
- Materials science
- Machine learning
Background:
- Current adsorption energy prediction methods struggle with dynamic solution systems and diverse spatial configurations.
- Traditional datasets are static, failing to capture the conformational space explored by dynamic systems over time.
Purpose of the Study:
- To introduce the Multi-Temporal Solution System (MTSS) dataset for temporally resolved adsorption prediction.
- To develop a novel deep learning model, SEP-Net, capable of modeling solution-level interactions.
Main Methods:
- Creation of the MTSS dataset with 500,000 temporally resolved configurations and adsorption energy labels across five solvents.
- Proposal of SEP-Net, a dual-channel graph network integrating rotational-invariant geometric learning and molecular SMILES embeddings.
- Experimental validation of SEP-Net's performance against traditional methods like MLP.
Main Results:
- SEP-Net achieved a Mean Absolute Error (MAE) of 211.02 kJ/mol on known solvents and 507.37 kJ/mol on unseen solvents.
- SEP-Net significantly outperformed MLP, demonstrating a substantial improvement in prediction accuracy (e.g., 3827.33 vs 507.37 kJ/mol on ACE solvent).
Conclusions:
- The MTSS dataset and SEP-Net establish new benchmarks for system-level adsorption prediction.
- Geometric deep learning effectively addresses the complexities of solute-solvent and solvent-solvent interactions in dynamic systems.
