Related Experiment Video
Updated: Sep 9, 2025

Generic Protocol for Optimization of Heterologous Protein Production Using Automated Microbioreactor Technology
Published on: December 15, 2017
PEST++IES How Many Iterations and Realizations, Finding the Point of Diminishing Returns
Trent J Farnum, Andrew T Leaf1, Michael N Fienen1
1U.S. Geologic Survey, Upper Midwest Water Science Center, Madison, WI.
For groundwater modeling, PEST++IES (Population Estimation through Sequential Testing) requires optimal ensemble sizes. Generally, 100-250 realizations and two iterations suffice for accurate history matching and uncertainty analysis.
Area of Science:
- Groundwater hydrology
- Computational modeling
- Geostatistics
Background:
- PEST++IES is a popular tool for groundwater model calibration and uncertainty analysis.
- Its ensemble smoother approach is efficient for highly parameterized models.
- Determining the optimal number of ensemble realizations and iterations is crucial for efficiency.
Purpose of the Study:
- To investigate the optimal number of ensemble realizations and iterations for PEST++IES.
- To evaluate the impact of ensemble size on model performance in groundwater modeling.
- To assess the trade-off between computational cost and accuracy in history matching.
Main Methods:
- A modified Freyberg model was used for simulations.
- Four iterations were performed with ensemble sizes ranging from 10 to 2000.
- Hydraulic conductivity, recharge, river conductance, and well flow rates were adjusted.
- Results were compared against a "truth" model using risk-based well capture zones and hydraulic conductivity fields.
Main Results:
- Ensemble sizes of 100 to 250 realizations generally yielded good results.
- Two PEST++IES iterations were found to be sufficient for most scenarios.
- Smaller ensemble sizes (e.g., 10-50) showed diminished performance.
- Larger ensemble sizes (e.g., >500) offered minimal additional improvement.
Conclusions:
- An ensemble size of 100-250 realizations and two iterations represents an efficient and effective configuration for PEST++IES.
- This finding helps optimize computational resources in groundwater modeling.
- The study provides practical guidance for users of PEST++IES for history matching and uncertainty analysis.
Related Concept Videos
Decision Making: P-value Method
First, a specific claim about the population parameter is proposed. The claim is based on the research question and is stated in a simple form. Further, an opposing statement to the claim is also stated. These statements can act as null and alternative hypotheses: a null hypothesis would be a neutral statement while the alternative hypothesis can...
Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving
In individual population analyses, different algorithms are employed, such as Cauchy's method, which uses a...
Limits to Natural Selection
Plotting and Calibrating the Root Locus
The maximum gain occurs at the breakaway points between open-loop poles on the real axis, while the minimum gain is...
Determination of Michaelis Constant and Maximum Elimination Rate
These parameters can be estimated by analyzing plasma concentration data post-drug administration. A notable example of this application is phenytoin, a drug with capacity-limited kinetics. It's recommended that phenytoin should be administered at two...
Construction of Root Locus
For positive gain values, the root locus exists on the real axis to the left of an odd number of finite open-loop poles or zeros. The root locus starts at the open-loop poles and traces the paths of the closed-loop poles as the gain...

