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Positive Selection Screen for Natural Product β-Catenin Inactivators.
Matthew W Boudreau1,2, Vitor F Freire3, Sophie C Corbett1
1Department of Medical Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA.
Biorxiv : the Preprint Server for Biology
|September 5, 2025
Summary
Natural product screening of prefractionated mixtures in cell-based
Area of Science:
- Natural product discovery
- Cell-based assays
- Oncogene research
Background:
- Cell-based phenotypic screening of natural products offers insights but faces challenges with mixture complexity and toxicity.
- Traditional screening methods often struggle with deconvoluting complex natural product mixtures.
- Toxins in natural products can interfere with cellular assays, leading to unreliable results.
Purpose of the Study:
- To mitigate challenges in natural product screening by using prefractionated mixtures in cell-based "up" assays.
- To identify natural products that can modulate oncogenic pathways.
- To explore novel therapeutic strategies targeting cancer.
Main Methods:
- High-throughput screening of 326,304 natural product samples (extracts and fractions).
- Utilized mammalian cells engineered to express an oncogenic β-catenin (β-cat) fusion protein.
- Assayed for degradation or compartmentalization of the β-cat fusion protein.
Main Results:
- Identified multiple natural product fractions that degraded the oncogenic β-cat fusion protein.
- Discovered fractions that relocated the β-cat fusion protein to inactive compartments.
- Isolated a compound that activates novel protein kinase Cs (PKCs), relocating β-cat to juxtamembrane vacuolar structures.
Conclusions:
- Prefractionation and cell-based "up" assays can overcome limitations in natural product screening.
- Natural products can provide novel mechanisms for targeting oncogenic proteins like β-catenin.
- This approach highlights the potential of natural products in drug discovery and cancer therapy.
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