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Methods to Classify Cytoplasmic Foci as Mammalian Stress Granules
Published on: May 12, 2017
tRNA modifications are required for stress granule formation and melanoma metastasis
Abstract:
Metastasis is the leading cause of cancer related deaths, however therapies specifically targeting metastasis are lacking and remain a dire therapeutic need in the clinic. Metastasis is a highly inefficient process that is inhibited by extracellular stress. Therefore, metastasizing cells that ultimately survive and successfully colonize distant organs must undergo molecular rewiring to mitigate stress. Wobble uridine modifications, especially 5-methoxycarbonylmethyl-2-thiouridine (mcm 5 s 2 U 34 ), have been implicated in stress response and poor prognosis of cancer patients. We use a patient derived xenograft (PDX) model of melanoma metastasis to study the role of the mcm 5 s 2 U 34 modification in the stress response of metastasizing cells. We find that upon depletion of elongator acetyltransferase complex subunit 1 (ELP1)- a component of the mcm 5 s 2 U 34 pathway on , and -codon-biased translation, migration, invasion, and metastatic burden in vivo is reduced. Further, we observe that stress granule components are enriched in a subset of codon-biased genes that are exclusively upregulated at the protein level in metastatic nodules compared to the primary tumor in our PDX model. Additionally, upon knockdown of ELP1, stress granule components have decreased protein expression with no significant change to their mRNA levels. Efficient translation, mediated by the carboxy-methylation arm of the mcm 5 s 2 U 34 modification, is required for metastasizing cancer cells to withstand stress via stress granule formation and increase survival throughout the metastatic cascade. This makes the mcm 5 s 2 U 34 machinery a potentially actionable therapeutic target, specific to metastatic disease.
Insights
Targeting the 5-methoxycarbonylmethyl-2-thiouridine (mcm5s2U34) modification pathway, specifically elongator acetyltransferase complex subunit 1 (ELP1), can reduce melanoma metastasis. This modification is crucial for cancer cell survival under stress.
Area of Science:
- Cancer Biology
- Molecular Biology
- Epigenetics
Background:
- Metastasis is the primary cause of cancer mortality, with limited targeted therapies available.
- Metastatic cells must adapt to extracellular stress for survival and colonization.
- Wobble uridine modifications, like 5-methoxycarbonylmethyl-2-thiouridine (mcm5s2U34), are linked to cancer prognosis and stress response.
Purpose of the Study:
- To investigate the role of mcm5s2U34 modification in the stress response of metastasizing melanoma cells.
- To explore the therapeutic potential of targeting the mcm5s2U34 pathway in metastatic cancer.
Main Methods:
- Utilized a patient-derived xenograft (PDX) model of melanoma metastasis.
- Depleted elongator acetyltransferase complex subunit 1 (ELP1), a key component of the mcm5s2U34 pathway.
- Analyzed changes in codon-biased translation, cell migration, invasion, and metastatic burden.
- Examined the enrichment of stress granule components in relation to gene expression at mRNA and protein levels.
Main Results:
- ELP1 depletion significantly reduced migration, invasion, and metastatic burden in vivo.
- Stress granule components were enriched in codon-biased genes upregulated at the protein level in metastatic nodules.
- ELP1 knockdown led to decreased protein expression of stress granule components without altering mRNA levels.
Conclusions:
- Efficient translation, facilitated by the mcm5s2U34 modification, is vital for cancer cell stress adaptation and survival during metastasis.
- The mcm5s2U34 pathway, particularly ELP1, represents a potential therapeutic target for metastatic melanoma.
- Targeting this pathway may inhibit stress granule formation and enhance cancer cell vulnerability.
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