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Updated: Jan 18, 2026

Parallel Measurement of Circadian Clock Gene Expression and Hormone Secretion in Human Primary Cell Cultures
Published on: November 11, 2016
External Cues as Transducers of Peripheral Tissue-Specific Molecular Clocks to Regulate Systemic Circadian Rhythms
Zhe Zhang1,2, Bei-Bei Liu3, Shu-Zhe Ding1,2
1Key Laboratory of Adolescent Health Assessment and Exercise Intervention, Ministry of Education, East China Normal University, Shanghai, China.
Abstract:
The molecular clock exhibits distinct characteristics across various tissues and can be synchronized by particular stimuli. Furthermore, there is an intricate interplay among the molecular clocks within different tissues. In this context, we present an overview of the tissue-specific molecular clock and discuss pivotal nonphotic regulators that govern the host's circadian rhythms and metabolic processes. Intermittent time-restricted feeding establishes rhythmicity and harmony in hepatic proteasome activity through various pathways and modulates hormone levels and lifespan extension via the synergistic action of molecular clocks and autophagy (AMPK, mTOR, SIRT1). High-fat diet (HFD) alters the molecular clock rhythms in the mediobasal hypothalamus (MBH), adipose tissue, and liver, with particularly pronounced changes observed in adipose tissue. HFD alters rhythm by inhibiting CLOCK:BMAL1 chromatin recruitment and activating the PPARγ pathway in the liver. The absence of liver CLOCK or intestinal BMAL1 mitigates metabolic disturbances, such as obesity, induced by long-term HFD. Meanwhile, intestinal microbiota also directly or indirectly regulates the host's circadian network and metabolism through micromolecules. Correspondingly, deletion of molecular clock genes alters the diurnal variations, composition, and function of the gut microbiome at the genus level in mice. The mechanisms underlying the tissue-specific effects of the gut microbiota on peripheral clocks are currently being unraveled and require further elucidation, with PPAR emerging as a pivotal factor in this process. The effect of exercise on the molecular clock of skeletal muscle varies depending on distinct muscle fiber types and the intensity of exercise. Identifying the optimal combination of chrono-exercise and intermittent fasting represents a substantial research opportunity. Additionally, the interplay between the molecular clocks of various tissues in response to specific rhythmic cues merits thorough investigation.
Insights
This study explores how tissue-specific molecular clocks regulate circadian rhythms and metabolism. Intermittent feeding and diet impact these clocks, highlighting opportunities for health interventions.
Area of Science:
- Chronobiology
- Metabolic Regulation
- Molecular Biology
Background:
- The molecular clock is tissue-specific and influenced by external stimuli.
- Interactions between tissue clocks and nonphotic regulators are crucial for circadian rhythms and metabolism.
Purpose of the Study:
- To provide an overview of tissue-specific molecular clocks.
- To discuss nonphotic regulators of circadian rhythms and metabolic processes.
- To examine the impact of diet and interventions on molecular clocks.
Main Methods:
- Review of existing literature on molecular clocks, nonphotic regulators, and dietary interventions.
- Analysis of studies investigating high-fat diet (HFD) effects on molecular rhythms.
- Examination of the role of gut microbiota and exercise in circadian regulation.
Main Results:
- Intermittent time-restricted feeding synchronizes hepatic proteasome activity and extends lifespan.
- HFD disrupts molecular clock rhythms in the hypothalamus, adipose tissue, and liver.
- Absence of CLOCK or BMAL1 mitigates HFD-induced metabolic disturbances; gut microbiota and exercise modulate peripheral clocks.
Conclusions:
- Tissue-specific molecular clocks are key to metabolic health and lifespan.
- Diet, gut microbiota, and exercise significantly influence circadian rhythms and metabolism.
- Further research into chrono-exercise and intermittent fasting combinations is warranted.
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