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Addressing Missingness in Predictive Models That Use Electronic Health Record Data
Shanshan Lin1, Rolf H H Groenwold2, Hemalkumar B Mehta3
1Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland (S.L.).
Missing data in electronic health records (EHR) poses challenges for clinical prediction models. This article addresses EHR data missingness, methods for handling it, and recommendations for model validation and implementation.
Area of Science:
- Health Informatics
- Clinical Epidemiology
- Biostatistics
Background:
- Electronic health record (EHR) data are crucial for developing clinical prediction models.
- Missing data is a common issue in EHRs, impacting model accuracy and reliability.
- Current guidelines for prediction models offer limited recommendations for handling missing EHR data.
Purpose of the Study:
- To characterize missingness patterns in EHR data.
- To summarize methods for addressing missing data in prediction model development.
- To provide recommendations for validating and implementing prediction models with missing EHR data.
Main Methods:
- Review of existing literature on missing data in EHRs.
- Characterization of systematic and nonsystematic missingness in EHR datasets.
- Summary of statistical techniques for handling missing data in prediction modeling.
Main Results:
- EHR data exhibit both systematic and nonsystematic missingness.
- Various imputation and modeling techniques can address missing data.
- Lack of standardized guidelines for missing data in clinical prediction models.
Conclusions:
- Addressing missing EHR data is essential for robust clinical prediction models.
- Recommendations are provided for model development, validation, and implementation.
- Further research is needed to improve handling of missing EHR data in clinical practice.
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