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VDJ-Seq: Deep Sequencing Analysis of Rearranged Immunoglobulin Heavy Chain Gene to Reveal Clonal Evolution Patterns of B Cell Lymphoma
Published on: December 28, 2015
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Tumor microenvironment differences between diagnostic and relapsed classic Hodgkin lymphoma revealed by scRNA-seq
Yifan Yin1, Shinya Rai1,2, Aixiang Jiang1
1Centre for Lymphoid Cancer, BC Cancer, Vancouver, BC, Canada.
Blood Advances
|September 9, 2025
Summary
In classical Hodgkin lymphoma relapse, a specific type of naïve B cell expressing galectin-9 emerges, interacting with regulatory T cells to create an immunosuppressive tumor microenvironment.
Area of Science:
- Immunology
- Oncology
- Genomics
Background:
- Classical Hodgkin lymphoma (CHL) features a complex tumor microenvironment (TME) aiding disease progression.
- The role of nonmalignant B cells in CHL relapse is not well understood.
- Hodgkin and Reed-Sternberg (HRS) cells are known to recruit immune cells.
Purpose of the Study:
- To investigate the role of nonmalignant B cells in CHL relapse.
- To identify distinct B-cell populations and their functions in relapsed CHL.
- To understand the spatial and transcriptional dynamics of the relapsed TME.
Main Methods:
- Single-cell RNA sequencing (scRNA-seq) on paired diagnostic and relapsed CHL samples.
- Validation using independent cohorts with scRNA-seq and immunohistochemistry.
- Cell-cell interaction analysis and spatial analysis by imaging mass cytometry.
Main Results:
- Early-relapse CHL shows an enrichment of naïve B cells and a reduction of memory B cells.
- Naïve B cells in early relapse express high levels of LGALS9 (galectin-9), an immunosuppressive gene.
- LGALS9+ naïve B cells interact with HAVCR2 (TIM-3)+ regulatory T cells (Tregs), forming an immunosuppressive niche.
Conclusions:
- A novel population of galectin-9-positive naïve B cells with immunoregulatory potential exists in early-relapse CHL.
- These cells contribute to an immunosuppressive TME in relapsed CHL.
- Findings offer new insights into the TME architecture in relapsed CHL.

