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Updated: Jan 18, 2026

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Gene-environment Interaction Models to Unmask Susceptibility Mechanisms in Parkinson's Disease
Published on: January 7, 2014
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Genetic Modifiers of Parkinson's Disease: A Case-Control Study
Matthew J Kmiecik1, Michael V Holmes1, Pierre Fontanillas1
123andMe, Inc., Sunnyvale, California, USA.
Annals of Clinical and Translational Neurology
|September 10, 2025
Summary
Genetic factors like LRRK2 p.G2019S and GBA1 p.N409S significantly impact Parkinson's disease (PD) risk and symptoms. Polygenic risk scores (PRS) and APOE E4 also influence PD penetrance and presentation.
Area of Science:
- Genetics and Neurology
- Neurodegenerative Diseases Research
- Parkinson's Disease Etiology
Background:
- Parkinson's disease (PD) has a complex genetic basis involving specific mutations and risk alleles.
- Understanding the combined effects of genetic factors is crucial for predicting PD risk and progression.
Purpose of the Study:
- To investigate the impact of LRRK2 p.G2019S, GBA1 p.N409S, polygenic risk scores (PRS), and APOE E4 on PD penetrance, risk, and symptom profiles.
- To assess how these genetic factors interact to influence the likelihood and clinical presentation of Parkinson's disease.
Main Methods:
- A large-scale, US-based observational case-control study utilizing data from 23andMe Inc. and the Fox Insight Genetic Substudy (FIGS).
- Analysis of over 7.5 million participants, including specific cohorts of LRRK2 p.G2019S and GBA1 p.N409S carriers, dual carriers, and noncarriers.
- Utilized survival models for cumulative PD incidence and logistic regressions for symptom associations, with PRS calculated from a European genome-wide association study.
Main Results:
- By age 80, cumulative PD incidence was highest in dual LRRK2/GBA1 carriers (30%), followed by LRRK2 p.G2019S carriers (24%), GBA1 p.N409S carriers (4%), and noncarriers (2%).
- Higher PRS correlated with increased variant penetrance and earlier PD diagnosis. GBA1 p.N409S was linked to a greater non-motor symptom burden (e.g., REM sleep behavior disorder, cognitive deficits), while LRRK2 p.G2019S had the lowest.
- APOE E4 dosage increased the likelihood of reporting hallucinations and cognitive impairment.
Conclusions:
- Genetic screening can effectively identify individuals for neuroprotective trials.
- Genotype-specific outcome measures can refine clinical trial design and interpretation for Parkinson's disease.
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