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Updated: Jan 18, 2026

An Open-Source Normothermic Perfusion System Designed for Research Scientists
Published on: July 18, 2025
Towards goal-directed perfusion - Part I: Developing physiology-inspired mathematical framework using high-resolution
Mansour T A Sharabiani1, Alireza S Mahani2, Richard W Issitt3,4,5
1School of Public Health, Imperial College, London, UK.
Insights
A new model, GARIX, accurately predicts oxygen extraction ratio during paediatric cardiopulmonary bypass. This advances understanding of oxygen dynamics and supports intelligent perfusion control in young patients.
Area of Science:
- Physiology
- Biomedical Engineering
- Data Science
Background:
- Understanding intraoperative oxygen demand during paediatric cardiopulmonary bypass (CPB) is crucial but challenging.
- Existing models for oxygen demand often oversimplify physiological relationships, particularly temperature dependence.
- Paediatric populations present unique physiological dynamics during CPB that require specialized modeling.
Purpose of the Study:
- To develop and validate a novel, high-resolution model (GARIX) for predicting oxygen extraction ratio (OER) minute-by-minute.
- To capture the complex, dynamic interplay of factors influencing oxygenation during paediatric CPB.
- To provide a foundation for improved real-time monitoring and perfusion control strategies.
Main Methods:
- Developed GARIX, a Global AutoRegressive Integrated model with eXogenous variables and an equilibrium force, incorporating autoregressive, exogenous, and equilibrium terms.
- Utilized high-resolution intraoperative data from 293 paediatric CPB procedures (20,443 minutes).
- Evaluated model performance using K-fold cross-validation, simulations, and bootstrap confidence intervals, comparing against a baseline model (bGARIX).
Main Results:
- GARIX accurately reproduced physiologically plausible oxygen extraction ratio dynamics.
- The model identified significant nonlinear relationships between temperature, age, weight, and oxygen demand.
- Analysis revealed slower OER adaptation to changes in cardiac index and hemoglobin, but faster adaptation to temperature shifts.
Conclusions:
- GARIX provides an interpretable, physiology-aligned model for paediatric CPB oxygenation dynamics.
- The model enables estimation of dynamic responses and latent oxygen demand, enhancing clinical insights.
- GARIX serves as a foundation for developing advanced real-time monitoring and intelligent perfusion control systems.
Abstract:
BackgroundDuring cardiopulmonary bypass (CPB), goal-directed perfusion (GDP) seeks to match oxygen delivery to metabolic demand, but the dynamics of oxygen extraction and intraoperative oxygen demand remain poorly understood, especially in paediatric populations. Existing models rely on limited data and assume, for example, a linear relationship between log oxygen demand and temperature.MethodsWe developed GARIX (Global AutoRegressive Integrated model with eXogenous variables and an equilibrium force) to predict minute-by-minute changes in oxygen extraction ratio (OER) using high-resolution intraoperative data. GARIX combines: (1) an autoregressive term group (ATG) encoding memory of past OER; (2) an exogenous term group (XTG) incorporating recent and planned changes in cardiac index (CI), haemoglobin (Hb), SaO2, and temperature; and (3) an equilibrium term group (ETG) that aligns oxygen consumption with demand via nonlinear temperature and patient-specific terms (log age, log weight, and interaction). A baseline model (bGARIX) used a linear temperature term and no patient-specific covariates. We trained on 20,443 min from 293 paediatric CPB procedures and evaluated performance through repeated K-fold cross-validation, simulations, and bootstrap confidence intervals.ResultsGARIX reproduced physiologically plausible OER dynamics. Lagged coefficients captured adaptive responses to CI, Hb, SaO2, and temperature. Equilibrium analysis estimated a Q10 of 2.5 with bGARIX, matching textbook values (2.4-2.7). Likelihood ratio tests confirmed GARIX's improved fit, revealing age- and weight-related heterogeneity and nonlinearity in temperature dependence. Variable importance showed ATG and XTG dominated predictive accuracy, underscoring the role of system dynamics. Simulations indicated slow OER response to CI and Hb and faster adaptation to temperature.ConclusionsGARIX offers an interpretable, physiology-aligned model of oxygenation dynamics in paediatric CPB, enabling estimation of dynamic responses and latent demand. It provides a foundation for clinical insights and future real-time monitoring and intelligent perfusion control.
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