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Predicting reaction conditions: a data-driven perspective.

Matthew Ball1,2, Dragos Horvath2, Thierry Kogej1

  • 1Molecular AI, Discovery Sciences RD, AstraZeneca 431 83 Gothenburg Sweden.

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|September 12, 2025
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Summary
This summary is machine-generated.

Machine learning models can predict chemical reaction conditions, but face challenges with data quality and representation. Using a novel graph-based input for Suzuki-Miyaura reactions improved predictive accuracy beyond simple popularity baselines.

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Area of Science:

  • Synthetic Chemistry
  • Computational Chemistry
  • Machine Learning

Background:

  • Optimizing reaction conditions is crucial for efficient, sustainable, and scalable chemical synthesis.
  • Machine learning (ML) shows promise for predicting reaction conditions in computer-aided synthesis planning (CASP).
  • Current ML models struggle with data quality, sparsity, reaction representation, and evaluation, often failing to outperform simple baselines.

Purpose of the Study:

  • To critically review state-of-the-art ML techniques for reaction condition prediction.
  • To identify innovations addressing key challenges in modeling chemical reactions.
  • To demonstrate the impact of reaction representation on model performance.

Main Methods:

  • Critical review of ML techniques for reaction condition prediction.
  • Case study on heteroaromatic Suzuki-Miyaura reactions using US patent data (USPTO).
  • Application of Condensed Graph of Reaction (CGR) representations as model inputs.

Main Results:

  • Identified key innovations addressing challenges in ML for reaction condition prediction.
  • Demonstrated that CGR-based inputs significantly enhance predictive power for Suzuki-Miyaura reactions.
  • Showed improved model performance exceeding literature-derived popularity baselines.

Conclusions:

  • Reaction representation is critical for improving ML models in CASP.
  • CGR offers a powerful alternative for representing reactions, enhancing predictive accuracy.
  • Future work should focus on data quality mitigation and advanced modeling strategies.