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Reliability and Usefulness of Seedling Plant Data in Cassava Breeding
Chalermpol Phumichai1, Hernan Ceballos2, Paphawe Pleeprom1
1Department of Agronomy, Faculty of Agriculture, Kasetsart University, Bangkok 10900, Thailand.
Plants (Basel, Switzerland)
|September 13, 2025
Summary
Cassava breeding can be accelerated by using seedling evaluation trial (SET) data. This data allows for estimating breeding values, complementing genomic selection and shortening the breeding cycle.
Area of Science:
- Plant breeding
- Genetics
- Agricultural science
Background:
- Cassava breeding traditionally requires extensive multi-year field evaluations.
- Genomic selection uses genotypically estimated breeding values (GEBVs) to shorten breeding cycles.
- Current seedling evaluation trials (SETs) involve intense visual selection without data collection, missing opportunities to study inheritance.
Purpose of the Study:
- To investigate the utility of SET data for estimating breeding values and understanding trait inheritance in cassava.
- To explore the complementarity of phenotypically estimated breeding values (PEBVs) from SET data and GEBVs.
Main Methods:
- Collected and analyzed three years of field evaluation data from cassava seedling evaluation trials (SETs).
- Assessed the performance of selected genotypes in subsequent single row trials (SRTs).
- Estimated phenotypically estimated breeding values (PEBVs) for progenitors using SET data.
Main Results:
- SET data provides valuable insights into trait dominance and can be used to estimate PEBVs.
- PEBVs derived from SET data can serve a similar purpose to GEBVs in breeding strategies.
- The study demonstrates the potential for integrating SET data into cassava breeding programs.
Conclusions:
- Seedling evaluation trials (SETs) offer a valuable, underutilized data source in cassava breeding.
- Utilizing SET data for PEBV estimation can complement genomic selection and accelerate breeding progress.
- This approach enhances the understanding of cassava trait inheritance and improves selection efficiency.
Keywords:
general combining abilityphenotypically estimated breeding values (PEBV)seedling plant informationspecific combining abilityunbiased populationsMore Related Videos
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