Machine Learning-Based Model for Predicting Coronary Heart Disease Using Preβ HDL and Cytokines as Plasma Biomarkers

Seema Singh Saharan1, Kate Townsend Creasy2, Lauren Birnbaum3

  • 1Department of Clinical Pharmacy, School of Pharmacy, University of California, San Francisco, United States.

Proceedings. International Conference on Computational Science and Computational Intelligence
|September 16, 2025
PubMed

Insights

Plasma Preβ High-Density Lipoprotein (HDL) and specific cytokines show high predictive accuracy for coronary heart disease (CHD) using machine learning. This discovery could lead to new diagnostic tools and therapeutic targets for CHD.

Area of Science:

  • Cardiovascular Disease Research
  • Biomarker Discovery
  • Machine Learning in Medicine

Background:

  • Coronary heart disease (CHD) is a leading global cause of mortality.
  • Improved prediction and early intervention methods for CHD are crucial.
  • Plasma biomarkers, including Preβ High-Density Lipoprotein (HDL) and cytokines, are being investigated for CHD risk assessment.

Purpose of the Study:

  • To evaluate the predictive efficacy of plasma Preβ HDL and cytokines for CHD.
  • To utilize machine learning (ML) algorithms for enhanced CHD risk prediction.
  • To identify specific biomarkers that can discriminate between CHD patients and control subjects.

Main Methods:

  • A case-control study involving 108 individuals (41 CHD, 67 controls).
  • Analysis of 35 plasma cytokines and Preβ HDL levels.
  • Application of random forest algorithms with feature engineering and synthetic data augmentation to 20,000 samples.

Main Results:

  • Individuals with CHD had significantly higher plasma Preβ HDL levels compared to controls.
  • A random forest model incorporating Preβ HDL and specific cytokines (FGF-Basic, MCP-1, Eotaxin, IL-10, IL-9, IL-1β) achieved 100% F1 score, accuracy, and AUROC.
  • These findings highlight the strong predictive power of these biomarkers.

Conclusions:

  • Plasma Preβ HDL and specific cytokines are highly effective predictors of CHD when analyzed with ML.
  • Further research into these biomarkers could identify novel drug targets for CHD.
  • ML methodologies enhance the potential of biomarker-based CHD risk assessment.

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