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Diagonal Method to Measure Synergy Among Any Number of Drugs
Published on: June 21, 2018
Cross-Modal Interaction-Aware Progressive Fusion Network for Drug-Target Interaction Prediction
Zhichong Cao1, Jing Xie2, Junlin Xu1
1School of Computer Science and Technology, Wuhan University of Science and Technology, Wuhan 430065, China.
Abstract:
Drug-target interaction (DTI) prediction plays a pivotal role in drug discovery. In recent years, deep learning-based models have been advanced rapidly, accelerating the identification of potential DTIs. However, how to effectively capture the cross-modal information from bidirectional DTIs and how to further fuse them remain challenges for existing methods. To address these issues, we propose a deep learning fusion framework termed cross-modal interaction-aware progressive fusion network (CIPFN) for DTI prediction. This framework introduces a bidirectional interaction-aware module to precisely align fine-grained interactions between drugs and proteins. In addition, a progressive fusion network is also developed, including both gated and convolutional fusion blocks, to efficiently extract critical information within drug-target relationships. Experimental results across five benchmark data sets demonstrate that the proposed CIPFN achieves significant improvements over some state-of-the-art methods on the metrics of AUROC, AUPRC, F1, sensitivity, and accuracy.
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