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Updated: Jan 17, 2026

Stretching Short Sequences of DNA with Constant Force Axial Optical Tweezers
Published on: October 13, 2011
Stretching a single sugar chain
Yun-Long Chen1, Chen-Chen Zheng1, Fu-Jia Tian1
1Hubei Key Laboratory of Cell Homeostasis, College of Life Sciences, School of Physics and Technology, Renmin Hospital of Wuhan University, Wuhan University, Wuhan 430072, PR China.
Abstract:
Single molecule-stretching experiments have been extensively performed to evaluate the mechanical properties of biomacromolecules including nucleic acids and proteins but very few on polysaccharides. Polygalacturonic acid (PGA), a major pectin component in plant cell walls, plays key roles in plant physiology. In this study, an assay was developed to stretch PGA molecules by single-molecule experiments. The aldehyde of the reduced end of PGA was attached to an aminosilane-coated glass while the other end was biotin-functionalized and attached to a streptavidin-coated microbead. The elasticity of PGA was investigated under wide solution conditions. The persistence length (P) of PGA decreased from 5.8 to 2.8 nm as the concentration of monovalent cations was increased to 4 M. Notably, increasing the concentration of divalent cations first decreased P from 5.8 to 0.97 nm then increased P to 2.1 nm, with a reversal around 200 mM, matching zeta-potential evidence of charge neutralization then charge reversal. Simulations results revealed that Ca2+ formed bidentate coordination and induced significant cross-linking of PGA, whereas Mg2+, due to its strong hydration shell, bound in a monodentate manner and induced softening but not cross-linking of PGA.
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