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USP7 mutations are associated with adverse outcomes in pediatric T cell acute lymphoblastic leukemia and lymphoma
Jun Li1, Yuan Yuan2, Feng-Feng Niu1
1Department of Clinical Laboratory Center, Key Laboratory of Major Diseases in Children Ministry of Education, Beijing Children's Hospital Capital Medical University, National Center for Children's Health, Beijing, 100045, China.
Insights
USP7 mutations in pediatric T-cell acute lymphoblastic leukemia/lymphoma (T-ALL/LBL) are linked to poorer outcomes. Identifying these USP7 mutations can improve prognostic accuracy for T-ALL/LBL patients.
Area of Science:
- Oncology
- Genetics
- Pediatric Hematology/Oncology
Background:
- Understanding genetic alterations in pediatric T-cell acute lymphoblastic leukemia/lymphoma (T-ALL/LBL) is crucial for improving treatment strategies.
- The role of USP7 alterations in T-ALL/LBL prognosis is not fully understood.
Purpose of the Study:
- To investigate the clinical features and long-term outcomes of pediatric T-ALL/LBL patients with USP7 mutations.
- To evaluate the prognostic significance of USP7 mutations, alone and in combination with NOTCH1 mutations.
Main Methods:
- Sanger sequencing was used to detect USP7 and NOTCH1 mutations in 313 pediatric T-ALL/LBL patients.
- Cox regression and nomogram models were employed to assess prognostic importance.
- Event-free survival (EFS) and overall survival (OS) were analyzed.
Main Results:
- USP7 mutations were identified in 12 patients, associated with older age and lower remission rates at day 15.
- Patients with USP7 mutations exhibited significantly worse EFS and OS.
- Concurrent analysis revealed USP7mutNOTCH1wt genotype correlated with the worst outcomes, while USP7wtNOTCH1mut showed the best outcomes.
- USP7 mutation, high MRD, and CNS leukemia were independent adverse prognostic factors.
Conclusions:
- USP7 mutations identify a subset of pediatric T-ALL/LBL patients with adverse outcomes.
- USP7 mutation status is a highly influential prognostic factor, enhancing prediction model accuracy.
- Incorporating USP7 mutation status into risk stratification may refine treatment decisions for T-ALL/LBL.
Abstract:
USP7 alterations in pediatric T-cell acute lymphoblastic leukemia/lymphoma (T-ALL/LBL) remains incompletely understood. We investigated the clinical features and long-term outcomes associated with USP7 mutations in a cohort of 313 pediatric T-ALL/LBL patients. USP7 and NOTCH1 mutations were detected by Sanger sequencing and their association with prognosis were analyzed. Cox regression and nomogram models were used to evaluate prognostic importance. We identified 12 patients with USP7 heterozygous mutations (10 T-ALL, 2 T-LBL) with older age and higher proportion of not remission at day 15 morphological evaluation. Patients with USP7 mutation showed significantly worse event-free survival (EFS) and overall survival (OS) compared to wild-type cases, both in T-ALL and combined T-ALL/LBL cohorts. Concurrent analysis of USP7 and NOTCH1 mutations revealed USP7mutNOTCH1wt genotype was associated with the worst, whereas USP7wtNOTCH1mut was linked to the best EFS and OS in both T-ALL and T-ALL/LBL groups. USP7 mutation, pre-consolidation MRD ≥ 10-4 and CNS leukemia were independent adverse factors for EFS, and the former two were also predictors for OS. USP7 mutation status was validated as the most influential prognostic factor, with prediction models including USP7 status showing enhanced accuracy. In conclusion, USP7 mutations define a subset of T-ALL/LBL patients with adverse outcomes on conventional intensive treatment.
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