Related Experiment Video
Updated: Jan 17, 2026

In Vivo Monitoring of Transcriptional Activity During Metabolic Transition Using a Bioluminescent Reporter in Yeast
Published on: February 21, 2025
Decoding butyrate fermentation with glucose as a model substrate: Parameter optimization and metagenomic insights.
Xiaoxiao Shi1, Shohei Yasuda1, Maria Tuohy2
1Civil Engineering, College of Science and Engineering, University of Galway, Galway, Ireland.
Optimizing anaerobic fermentation for butyrate production requires specific conditions. Researchers found pH 5.5, 37°C, and an inoculum-to-substrate ratio of 1:3 maximize butyrate yield, enhancing sustainable biochemicals.
Area of Science:
- Biotechnology
- Microbiology
- Biochemical Engineering
Background:
- Selective butyrate production via anaerobic fermentation is crucial for sustainable biochemicals.
- Mechanisms and optimal conditions for butyrate accumulation in anaerobic systems are not well-understood.
- Previous reports on optimal conditions for butyrate production are inconsistent.
Purpose of the Study:
- To investigate the effects of pH, temperature, and inoculum-to-substrate ratio (ISR) on selective butyrate production.
- To identify optimal conditions for maximizing butyrate yield in glucose fermentation.
- To elucidate the microbial and genetic mechanisms underlying butyrate biosynthesis.
Main Methods:
- Batch fermentation experiments using glucose as a substrate.
- Systematic variation of pH (4.5-7.0, 8.5-11.0), temperature (37°C, 55°C), and ISR (3:1 to 1:3).
- Metagenomic and functional gene analyses to assess microbial community and metabolic pathways.
Main Results:
- Optimal butyrate production was achieved at pH 5.5, 37°C, and an ISR of 1:3.
- Temperature and ISR significantly impacted microbial community structure.
- Key butyrate-producing genera identified include Clostridium, Caproicibacter, Caproicibacterium, Sporolactobacillus, and Ethanoligenens.
- Enrichment of reverse β-oxidation genes was observed under optimal conditions, indicating enhanced carbon chain elongation.
Conclusions:
- The study refines previously inconsistent reports by establishing optimal conditions for selective butyrate production.
- Metagenomic and functional analyses provide mechanistic insights into butyrate biosynthesis pathways.
- Findings offer practical strategies for enhancing butyrate yield in industrial anaerobic fermentation processes.
More Related Videos
06:58Analysis of Interactions between Endobiotics and Human Gut Microbiota Using In Vitro Bath Fermentation Systems
Published on: August 23, 2019
14:42Liquid Chromatography Coupled to Refractive Index or Mass Spectrometric Detection for Metabolite Profiling in Lysate-based Cell-free Systems
Published on: September 23, 2021
Related Concept Videos
Microbial Fermentation
Fates of Pyruvate
In aerobic organisms, pyruvate is metabolized via the citric acid cycle to produce reduced coenzymes NADH and FADH2. These coenzymes are then oxidized in the electron transport chain to produce ATP and, in the process, regenerate the NAD+ and FAD. As seen in some cell types and organisms, fermentation...