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Published on: May 31, 2024
Biomolecular condensate microstructure is invariant to sequence-encoded molecular and macroscopic properties
Daniel Tan1, Dilimulati Aierken1,2, Pablo L Garcia1
1Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ 08544, USA. jerellejoseph@princeton.edu.
Biomolecular condensates formed by prion-like low complexity domains (LCDs) exhibit small-world network structures. Sequence features dictate condensate microstructure and material properties, revealing multiscale structure-property relationships.
Area of Science:
- Biophysics
- Soft Matter Physics
- Computational Biology
Background:
- Biomolecular condensates, including those from prion-like low complexity domains (LCDs), are crucial for cellular function.
- These condensates are regulated by complex molecular interaction networks.
- Previous studies suggested distinct conformations and predicted small-world network microstructures in LCD condensates.
Purpose of the Study:
- To establish a framework linking single-molecule properties, condensate microstructure, and macroscopic material properties.
- To investigate the inherent small-world network properties of LCD-like polymers.
- To elucidate the general organizing principles of condensate microstructure.
Main Methods:
- Molecular simulation using a residue-resolution coarse-grained model.
- Graph-theoretic analysis of condensate microstructures.
- Investigation of naturally occurring and designed binary LCD sequences.
Main Results:
- LCD condensates inherently form small-world networks with hubs and cliques.
- Sequence features, such as non-blocky patterns and hydrophobicity, influence network topology and material properties like surface tension.
- Internal heterogeneity at the single-molecule level is encoded by network topology.
Conclusions:
- Small-world microstructures are a fundamental property of LCD condensates.
- Sequence composition and patterning systematically control multiscale structure-property relationships.
- This work provides general principles for understanding condensate organization and function.
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