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Chromatin Immunoprecipitation of Murine Brown Adipose Tissue
Published on: November 21, 2018
Air pollution modulates brown adipose tissue function through epigenetic regulation by HDAC9 and KDM2B
Rengasamy Palanivel1, Jean-Eudes Dazard1, Bongsoo Park2
1Cardiovascular Research Institute, Department of Medicine, Case Western Reserve University, Cleveland, Ohio, USA.
JCI Insight
|September 23, 2025
Summary
Air pollution exposure, specifically fine particulate matter (PM2.5), negatively impacts metabolism and brown adipose tissue (BAT) function. This study reveals PM2.5 alters BAT gene expression and epigenetic modifications, contributing to insulin resistance.
Area of Science:
- Environmental Health
- Metabolic Disease
- Epigenetics
Background:
- Air pollution is increasingly linked to metabolic disorders like insulin resistance and type 2 diabetes.
- Particulate matter (PM2.5) is a major component of air pollution with known health impacts.
Purpose of the Study:
- To investigate the effects of PM2.5 inhalation on metabolism and brown adipose tissue (BAT) function.
- To elucidate the molecular mechanisms underlying PM2.5-induced metabolic dysfunction in BAT.
Main Methods:
- Whole-body inhalation exposure to concentrated PM2.5 or filtered air for 24 weeks.
- Assessment of glucose uptake using 18F-fluorodeoxyglucose positron emission tomography.
- Analysis of differentially methylated regions, chromatin accessibility, and gene expression in BAT.
- Chromatin immunoprecipitation (ChIP) assays to confirm protein-DNA interactions.
Main Results:
- PM2.5 exposure impaired metabolism and altered BAT function, affecting thermogenesis, redox stress, lipid deposition, and fibrosis.
- Significant differential methylation and chromatin remodeling were observed in BAT following PM2.5 exposure.
- The histone deacetylase HDAC9 and histone demethylase KDM2B were identified as key regulators in PM2.5-induced BAT changes.
- Knockdown of Hdac9/Kdm2b improved BAT metabolism, while overexpression impaired it.
Conclusions:
- PM2.5 exposure induces detrimental epigenetic and transcriptional changes in brown adipose tissue, contributing to metabolic dysfunction.
- HDAC9 and KDM2B play critical roles in mediating the adverse effects of PM2.5 on BAT and overall metabolism.
- These findings provide mechanistic insights into how air pollution contributes to the pathogenesis of insulin resistance and type 2 diabetes.
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