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HYPK-Related Neurodevelopmental Syndrome: Case Report of Intellectual Disability, Developmental Delay, and Dysmorphic
Rahi Patel1, Rikhil Makwana1, Elaine Marchi1
1Department of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York, USA.
Clinical Genetics
|September 23, 2025
Summary
A new HYPK gene variant causes developmental delay, autism, and facial differences by disrupting protein acetylation. This study details the first described HYPK variant
Area of Science:
- Biochemistry
- Genetics
- Developmental Biology
Background:
- The HYPK protein regulates the NatA complex, which is crucial for N-terminal protein acetylation.
- Dysregulation of protein acetylation is implicated in various neurodevelopmental disorders.
Purpose of the Study:
- To characterize the phenotype and molecular basis of a de novo HYPK variant.
- To investigate the impact of the variant on HYPK's inhibitory function and NatA-mediated acetylation.
Main Methods:
- Clinical evaluation of a proband with developmental delay, autism, and facial dysmorphia.
- Biochemical analyses to assess HYPK's interaction with the NatA complex.
- Assessment of N-terminal protein acetylation levels.
Main Results:
- A male proband presented with de novo HYPK variant, developmental delay, autism, and facial dysmorphia.
- The identified HYPK variant demonstrated enhanced inhibitory activity on the NatA complex.
- Pathogenic variant led to altered NatA-mediated N-terminal protein acetylation.
Conclusions:
- This is the first phenotypic characterization of a pathogenic HYPK variant.
- The molecular mechanism involves enhanced inhibition of the NatA complex, impacting protein acetylation.
- Findings will aid in the diagnosis and management of individuals with HYPK-related disorders.
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