Proteome-wide Mendelian randomization and colocalization analysis identify therapeutic targets for cutaneous melanoma

Di Zhou1, Wenrong Luo1, Jiefeng Zou1

  • 1Department of Burns and Plastic Surgery, the second affiliated hospital of Naval Medical University, Shanghai, China.

Medicine
|September 24, 2025
PubMed

Insights

This study identified two plasma proteins, tyrosinase-related protein 1 and dipeptidase 1, associated with cutaneous melanoma (CM) risk. Dipeptidase 1 shows potential as a therapeutic target for CM, but may also be linked to dementia.

Area of Science:

  • Genetics
  • Oncology
  • Proteomics

Background:

  • Cutaneous melanoma (CM) is a life-threatening skin cancer requiring novel therapeutic strategies.
  • Identifying causal links between plasma proteins and CM is essential for targeted treatment development.

Purpose of the Study:

  • To discover plasma proteins as potential therapeutic targets for CM using Mendelian randomization and colocalization.
  • To assess potential adverse effects of targeting identified plasma proteins.

Main Methods:

  • Utilized genome-wide association data for 2940 plasma proteins from the UK Biobank Pharmaceutical Proteomics Project.
  • Integrated proteomic data with CM data from a Finnish cohort (3194 cases, 314,193 controls).
  • Performed proteome-wide analysis and colocalization to identify causal protein-CM associations.

Main Results:

  • Identified two proteins, tyrosinase-related protein 1 and dipeptidase 1, significantly associated with CM risk.
  • Dipeptidase 1 showed an inverse association with CM risk, suggesting therapeutic potential.
  • A potential link between dipeptidase 1 and dementia risk was also indicated.

Conclusions:

  • This research identified novel plasma protein targets for cutaneous melanoma.
  • Highlights the importance of evaluating potential adverse effects, such as dementia risk, when considering therapeutic targets.
  • Provides a foundation for developing personalized treatment strategies for CM.