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Updated: Jan 17, 2026

Isolation of Tonsillar Mononuclear Cells to Study Ex Vivo Innate Immune Responses in a Human Mucosal Lymphoid Tissue
Published on: June 14, 2020
T cell monocyte complexes exhibit distinct immune signatures during infection
Ningxin Kang1, Ashu Chawla2, Hannah Hillman1
1Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, CA 92037, USA.
Immune cell complexes in active tuberculosis (TB) and dengue show unique gene activity compared to single cells. This study reveals insights into cell-cell interactions and immune responses during infection.
Area of Science:
- Immunology
- Molecular Biology
- Infectious Diseases
Background:
- Immune cell communication via direct contact is vital for immune responses.
- Understanding cell-cell interactions at a molecular level is crucial for deciphering immune dynamics during infection.
Purpose of the Study:
- To develop a high-throughput method for analyzing the transcriptome and adaptive immune receptor repertoire of single cells within complexes.
- To investigate the transcriptomic differences between immune cells forming complexes and those that are not, in the context of active tuberculosis (TB) and dengue infections.
- To explore the role of intercellular RNA acquisition in cell-cell interactions during infection.
Main Methods:
- Developed an innovative high-throughput workflow for single-cell analysis of immune cell complexes.
- Utilized transcriptomic and adaptive immune receptor repertoire sequencing.
- Compared gene expression profiles and immune cell characteristics of cells in complexes versus singlets.
Main Results:
- Immune cell complexes in active TB and dengue exhibit distinct transcriptomic signatures compared to single cells, with increased immune activation and MHC-II complex gene expression.
- In TB patients, T cells within complexes showed a higher proportion of cytotoxic T cells, increased T cell receptor (TCR) clonality, and heightened immune activity at diagnosis versus post-therapy.
- A significant enrichment of 'dual-expressing' cells (co-expressing T cell and monocyte genes) was observed in complexes, suggesting intercellular RNA transfer.
Conclusions:
- Studying immune cell complexes at single-cell resolution offers novel insights into cell-cell interactions within the bloodstream during infection.
- The findings highlight the importance of cell-cell contact in shaping immune responses and gene expression patterns.
- Intercellular RNA acquisition may play a role in modulating immune cell function during infectious diseases.
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