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An Open-Source Framework for Virtual Bioequivalence Modeling and Clinical Trial Design.

Abdullah Hamadeh1, Moriah Pellowe1,2, Pierre Chelle1

  • 1School of Pharmacy, University of Waterloo, Waterloo, Ontario, Canada.

CPT: Pharmacometrics & Systems Pharmacology
|September 24, 2025
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Summary
This summary is machine-generated.

This study introduces VBEToolbox, an R package for virtual bioequivalence (VBE) assessment. It streamlines in silico modeling using in vitro and in vivo data to reduce human testing for drug development.

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Area of Science:

  • Pharmacokinetics and Pharmacodynamics
  • Computational Biology and Bioinformatics
  • Drug Development and Regulatory Science

Background:

  • Bioequivalence (BE) assessment traditionally requires extensive human testing.
  • In silico virtual bioequivalence (VBE) offers a promising alternative to reduce human trials.
  • Standardized computational workflows are needed for reliable VBE assessments.

Purpose of the Study:

  • Introduce the VBEToolbox R package for standardized computational VBE workflows.
  • Integrate in vitro and in vivo data for pharmacokinetic model training and VBE.
  • Demonstrate the application of VBE for determining necessary study sizes and statistical power.

Main Methods:

  • Developed the VBEToolbox R package within the Open Systems Pharmacology framework.
  • Employed a nonparametric approach to handle parameter non-identifiability and uncertainty.
  • Integrated in vitro data (skin permeation, dissolution) and in vivo data (absorption) into mechanistic and physiologically based pharmacokinetic models.
  • Utilized clinical data for inferring inter-individual variability and establishing in vitro-to-in vivo extrapolations.

Main Results:

  • Successfully demonstrated VBE for testosterone dermal formulations using an in vitro/in vivo dermal absorption model.
  • Assessed VBE for oral bupropion formulations by integrating in vitro dissolution data into a physiologically based pharmacokinetic model.
  • Illustrated the utility of VBEToolbox in streamlining VBE workflows and determining virtual study designs.

Conclusions:

  • VBEToolbox provides a standardized framework for computational VBE assessments.
  • In silico approaches, like those enabled by VBEToolbox, can significantly reduce the need for human bioequivalence studies.
  • The presented case studies highlight key considerations for developing and applying VBE models in drug development.