Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

¹H NMR: Long-Range Coupling01:27

¹H NMR: Long-Range Coupling

2.6K
The coupling interactions of nuclei across four or more bonds are usually weak, with J values less than 1 Hz. While these are usually not observed in spectra, the presence of multiple bonds along the coupling pathway can result in observable long-range coupling.
In alkenes, spin information is communicated via σ–π overlap, as seen in allylic (four-bond) and homoallylic (five-bond) couplings. These coupling interactions are stronger when the σ bond is parallel to the alkene...
2.6K
Linear Approximation in Time Domain01:21

Linear Approximation in Time Domain

345
Nonlinear systems often require sophisticated approaches for accurate modeling and analysis, with state-space representation being particularly effective. This method is especially useful for systems where variables and parameters vary with time or operating conditions, such as in a simple pendulum or a translational mechanical system with nonlinear springs.
For a simple pendulum with a mass evenly distributed along its length and the center of mass located at half the pendulum's length,...
345
Linear Approximation in Frequency Domain01:26

Linear Approximation in Frequency Domain

357
Linear systems are characterized by two main properties: superposition and homogeneity. Superposition allows the response to multiple inputs to be the sum of the responses to each individual input. Homogeneity ensures that scaling an input by a scalar results in the response being scaled by the same scalar.
In contrast, nonlinear systems do not inherently possess these properties. However, for small deviations around an operating point, a nonlinear system can often be approximated as linear....
357
Vector Algebra: Method of Components01:08

Vector Algebra: Method of Components

18.8K
It is cumbersome to find the magnitudes of vectors using the parallelogram rule or using the graphical method to perform mathematical operations like addition, subtraction, and multiplication. There are two ways to circumvent this algebraic complexity. One way is to draw the vectors to scale, as in navigation, and read approximate vector lengths and angles (directions) from the graphs. The other way is to use the method of components.
In many applications, the magnitudes and directions of...
18.8K
Predicting Products: Substitution vs. Elimination02:52

Predicting Products: Substitution vs. Elimination

13.8K
When a nucleophile and an alkyl halide react, nucleophilic substitution and β-elimination reactions compete to generate products.
The following factors can influence the mechanisms competing against each other:
13.8K
¹H NMR: Interpreting Distorted and Overlapping Signals01:02

¹H NMR: Interpreting Distorted and Overlapping Signals

1.5K
Spin systems where the difference in chemical shifts of the coupled nuclei is greater than ten times J are called first-order spin systems. These nuclei are weakly coupled, and their chemical shifts and coupling constant can generally be estimated from the well-separated signals in the spectrum.
As Δν decreases and the signals move closer, the doublets appear increasingly distorted. The intensities of the inner lines increase at the cost of those of the outer lines as the signals are...
1.5K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Exponential convergence of the local diabatic representation for nonadiabatic eigenvalue problems.

Physical chemistry chemical physics : PCCP·2026
Same author

Quantum geometrical molecular dynamics.

Science advances·2025
Same author

Invariance of Energy Exchange Rates for Light-Dressed Systems.

The journal of physical chemistry letters·2025
Same author

Operando Raman characterization of unique electroinduced molecular tautomerization in zero-gap electrolyzers promotes CO<sub>2</sub> reduction.

Proceedings of the National Academy of Sciences of the United States of America·2025
Same author

Quantum Chemistry Density Matrix Renormalization Group in the Discrete Variable Representation.

Journal of chemical theory and computation·2025
Same author

Exploiting Quantum Light-Matter Interaction for Probing and Controlling Molecules.

The journal of physical chemistry letters·2025
Same journal

Nuclear Gradients from Auxiliary-Field Quantum Monte Carlo and Their Applications in ML-Driven Geometry Optimization and Transition State Search.

Journal of chemical theory and computation·2026
Same journal

Correction to "Cluster-in-Molecule Local Correlation Method with an Accurate Distant Pair Correction for Large Systems".

Journal of chemical theory and computation·2026
Same journal

Machine-Learned Force Fields for Lattice Dynamics at Coupled-Cluster Level Accuracy.

Journal of chemical theory and computation·2026
Same journal

Systematic Molecularity-Dependent Entropy Errors in Continuum/RRHO Solution Thermochemistry: Origin and Correction.

Journal of chemical theory and computation·2026
Same journal

After 100 Years of Quantum Mechanics: Toward a Constructive Observation-Centered Perspective.

Journal of chemical theory and computation·2026
Same journal

Sample-Based Quantum Diagonalization Methods for Modeling the Photochemistry of Diazirine and Diazo Compounds.

Journal of chemical theory and computation·2026
See all related articles

Related Experiment Video

Updated: Jan 16, 2026

Inter-Brain Synchrony in Open-Ended Collaborative Learning: An fNIRS-Hyperscanning Study
04:44

Inter-Brain Synchrony in Open-Ended Collaborative Learning: An fNIRS-Hyperscanning Study

Published on: July 21, 2021

4.9K

Linked Product Approximation to the Global Electronic Overlap Matrix.

Yujuan Xie1,2, Bing Gu1,2

  • 1Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou, Zhejiang 310024, China.

Journal of Chemical Theory and Computation
|September 25, 2025
PubMed
Summary
This summary is machine-generated.

Calculating the electronic overlap matrix is computationally expensive. We introduce an approximation using nearest-neighbor overlap matrices, significantly reducing computational cost while accurately modeling nonadiabatic conical intersection dynamics.

More Related Videos

High-throughput Identification of Synergistic Drug Combinations by the Overlap2 Method
07:51

High-throughput Identification of Synergistic Drug Combinations by the Overlap2 Method

Published on: May 21, 2018

12.5K
Operation of the Collaborative Composite Manufacturing CCM System
10:09

Operation of the Collaborative Composite Manufacturing CCM System

Published on: October 1, 2019

7.1K

Related Experiment Videos

Last Updated: Jan 16, 2026

Inter-Brain Synchrony in Open-Ended Collaborative Learning: An fNIRS-Hyperscanning Study
04:44

Inter-Brain Synchrony in Open-Ended Collaborative Learning: An fNIRS-Hyperscanning Study

Published on: July 21, 2021

4.9K
High-throughput Identification of Synergistic Drug Combinations by the Overlap2 Method
07:51

High-throughput Identification of Synergistic Drug Combinations by the Overlap2 Method

Published on: May 21, 2018

12.5K
Operation of the Collaborative Composite Manufacturing CCM System
10:09

Operation of the Collaborative Composite Manufacturing CCM System

Published on: October 1, 2019

7.1K

Area of Science:

  • Quantum chemistry
  • Computational physics
  • Chemical dynamics

Background:

  • The Born-Oppenheimer approximation is a cornerstone of molecular quantum mechanics.
  • Nonadiabatic conical intersections are crucial for understanding many chemical processes.
  • Calculating the global many-electron wave function overlap matrix is computationally intensive.

Purpose of the Study:

  • To develop a computationally efficient method for constructing the electronic overlap matrix.
  • To reduce the computational cost associated with modeling nonadiabatic conical intersection dynamics.
  • To assess the accuracy of an approximate overlap matrix for wave packet dynamics.

Main Methods:

  • Developed an approximation for the electronic overlap matrix using nearest-neighbor overlap matrices (links).
  • Employed the discrete variable local diabatic representation for numerically exact simulations.
  • Utilized a proton-coupled electron transfer model for validation.

Main Results:

  • The approximation significantly reduces computational effort by limiting electronic structure calculations to nearest-neighbor overlaps.
  • The approximate overlap matrix showed noticeable differences from exact calculations.
  • Conical intersection dynamics simulated with the approximate matrix closely matched those using the exact matrix.

Conclusions:

  • The proposed approximation offers a computationally feasible approach to constructing electronic overlap matrices.
  • This method enables accurate modeling of nonadiabatic conical intersection dynamics with reduced computational cost.
  • The approximation is effective for simulating complex chemical dynamics, such as proton-coupled electron transfer.