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Molecular-Level Insights into the NMR Relaxivity of Gadobutrol Using Quantum and Classical Molecular Simulations
Thiago J Pinheiro Dos Santos1, Carla C Fraenza2,3, Giselle de Araujo Lima E Souza2
1Department of Chemical and Biomolecular Engineering, Rice University, Houston, Texas 77005, United States.
Abstract:
MRI is an indispensable diagnostic tool in modern medicine; however, understanding the molecular-level processes governing NMR relaxation of water in the presence of MRI contrast agents remains a challenge, hindering the molecular-guided development of more effective contrast agents. By using quantum-based polarizable force fields, the first-of-its-kind molecular dynamics (MD) simulations of Gadobutrol are reported where the 1H NMR longitudinal relaxivity r 1 of the aqueous phase is determined without any adjustable parameters. The MD simulations of r 1 dispersion (i.e., frequency dependence) show good agreement with measurements at frequencies of interest in clinical MRI. Importantly, the simulations reveal key insights into the molecular level processes leading to r 1 dispersion by decomposing the NMR dipole-dipole autocorrelation function G(t) into a discrete set of molecular modes, analogous to the eigenmodes of a quantum harmonic oscillator. The molecular modes reveal important aspects of the underlying mechanisms governing r 1, such as its multiexponential nature and the importance of the second eigenmodal decay. By simply analyzing the MD trajectories on a parameter-free approach, the Gadobutrol simulations show that the outer-shell water contributes ∼50% of the total relaxivity r 1 compared to the inner-shell water, in contrast to simulations of (nonchelated) gadolinium-aqua where the outer shell contributes only ∼15% of r 1. The deviation between simulations and measurements of r 1 below clinical MRI frequencies is used to determine the low-frequency electron-spin relaxation time for Gadobutrol, in good agreement with independent studies.
Insights
Molecular dynamics simulations reveal how Gadobutrol, an MRI contrast agent, affects water’s NMR relaxation. This parameter-free approach provides insights into developing more effective MRI contrast agents by understanding molecular-level processes.
Area of Science:
- Computational Chemistry
- Magnetic Resonance Imaging (MRI)
- Molecular Dynamics
Background:
- MRI is crucial for medical diagnostics, but understanding contrast agent molecular interactions is challenging.
- Developing improved MRI contrast agents requires detailed knowledge of water's NMR relaxation processes.
- Current understanding of molecular-level mechanisms governing relaxivity is limited.
Purpose of the Study:
- To perform the first molecular dynamics simulations of Gadobutrol using quantum-based polarizable force fields.
- To determine the 1H NMR longitudinal relaxivity (r1) of the aqueous phase without adjustable parameters.
- To elucidate the molecular-level processes governing r1 dispersion and contrast agent effectiveness.
Main Methods:
- Utilized quantum-based polarizable force fields for molecular dynamics (MD) simulations of Gadobutrol.
- Calculated 1H NMR longitudinal relaxivity (r1) dispersion (frequency dependence) directly from MD trajectories.
- Decomposed the NMR dipole-dipole autocorrelation function into molecular modes for mechanistic insights.
Main Results:
- MD simulations of r1 dispersion showed good agreement with clinical MRI frequencies.
- Outer-shell water contributed approximately 50% to Gadobutrol's total relaxivity, unlike gadolinium-aqua (15%).
- Identified the crucial role of the second eigenmodal decay in governing r1 and its multiexponential nature.
Conclusions:
- This parameter-free MD approach accurately simulates Gadobutrol's NMR relaxivity and its frequency dependence.
- Outer-shell water dynamics significantly influence relaxivity, offering a key target for contrast agent design.
- The study provides fundamental molecular insights crucial for developing next-generation MRI contrast agents.
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