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Comparing Metastatic Clear Cell Renal Cell Carcinoma Model Established in Mouse Kidney and on Chicken Chorioallantoic Membrane
Published on: February 8, 2020
Vitamin C Selectively Inhibits Kidney Renal Clear Cell Carcinoma Cell Growth by Suppressing the HIF-1 Pathway
Che Wang1,2, Yaoyang Zhou1, Yu Liang1
1Department of Radiotherapy, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, People's Republic of China.
Aim:
To observe the effect of vitamin C on Kidney renal clear cell carcinoma (KIRC) and investigate its mechanism.
Methods And Results:
Firstly, 29 vitamin C direct target proteins (DPTs) were identified by Drug Bank 5.0, and the protein-protein interaction (PPI) network and signaling pathways of vitamin C DPTs were analyzed. The results showed that vitamin C was not only related to KIRC, but also to the HIF-1 pathway. Meanwhile, the top 300 highly expressed genes of KIRC were obtained by GEPIA. Next, We compared the genes of four vitamin C targets in the PPI network with highly expressed genes in KIRC. Interestingly, these common genes are also involved in HIF-1 pathway. Additionally, we utilized RNA-Seq technology to explore the differentially expressed genes in KIRC with vitamin C compared to those not intervened. We observed that these differentially expressed genes exhibited a close association with hypoxia. Finally, we observed the inhibitory effect of Vitamin C on KIRC by Cell Counting Kit-8 (CCK8) assay, real-time quantitative PCR, Western blotting, flow cytometry, and colony formation assay, and confirmed that Vitamin C inhibits the growth of KIRC cells through the HIF-1 pathway.
Conclusion:
Through bioinformatics analyses, we identified the molecular mechanism of vitamin C's role in KIRC and verified it through a series of experiments. Combined bioinformatics analysis will play an important role in future drug-disease interaction studies.
Insights
Vitamin C inhibits kidney renal clear cell carcinoma (KIRC) growth by targeting the HIF-1 pathway. This study used bioinformatics and experimental assays to confirm vitamin C
Area of Science:
- Oncology
- Biochemistry
- Bioinformatics
Background:
- Kidney renal clear cell carcinoma (KIRC) is a significant health concern.
- Understanding the molecular mechanisms of KIRC is crucial for developing effective treatments.
- Vitamin C's potential role in cancer therapy warrants investigation.
Purpose of the Study:
- To investigate the effect of vitamin C on KIRC.
- To elucidate the underlying molecular mechanisms of vitamin C's action in KIRC.
- To explore the relationship between vitamin C, KIRC, and the HIF-1 pathway.
Main Methods:
- Bioinformatics analysis of vitamin C direct target proteins (DPTs) and KIRC gene expression data.
- Protein-protein interaction (PPI) network and pathway analysis.
- RNA-sequencing (RNA-Seq) to identify differentially expressed genes.
- In vitro assays including CCK8, real-time quantitative PCR, Western blotting, flow cytometry, and colony formation assay.
Main Results:
- Vitamin C DPTs are linked to KIRC and the HIF-1 pathway.
- Common genes between vitamin C targets and KIRC are involved in the HIF-1 pathway.
- Differentially expressed genes in KIRC treated with vitamin C are associated with hypoxia.
- Vitamin C demonstrated an inhibitory effect on KIRC cell growth in vitro.
- Vitamin C inhibits KIRC growth via the HIF-1 pathway.
Conclusions:
- Bioinformatics analysis successfully identified the molecular mechanism of vitamin C in KIRC.
- Experimental validation confirmed vitamin C's inhibitory role in KIRC through the HIF-1 pathway.
- Integrated bioinformatics and experimental approaches are valuable for drug-disease interaction studies.
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