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Identifying the Effects of BRCA1 Mutations on Homologous Recombination using Cells that Express Endogenous Wild-type BRCA1
Published on: February 17, 2011
EXO1 as a therapeutic target for Fanconi Anaemia, ZRSR2 and BRCA1-A complex deficient cancers
Marija Maric1, Sandra Segura-Bayona1, Raviprasad Kuthethur2
1DSB Repair Metabolism Laboratory, The Francis Crick Institute, London, UK.
Abstract:
Exonuclease EXO1 performs multiple roles in DNA replication and DNA damage repair (DDR). However, EXO1 loss is well-tolerated, suggesting the existence of compensatory mechanisms that could be exploited in DDR-deficient cancers. Using CRISPR screening, we find EXO1 loss as synthetic lethal with many DDR genes somatically inactivated in cancers, including Fanconi Anaemia (FA) pathway and BRCA1-A complex genes. We also identify the spliceosome factor and tumour suppressor ZRSR2 as synthetic lethal with loss of EXO1 and show that ZRSR2-deficient cells are attenuated for FA pathway activation, exhibiting cisplatin sensitivity and radial chromosome formation. Furthermore, FA or ZRSR2 deficiencies depend on EXO1 nuclease activity and can be potentiated in combination with PARP inhibitors or ionizing radiation. Finally, we uncover dysregulated replication-coupled repair as the driver of synthetic lethality between EXO1 and FA pathway attributable to defective fork reversal, elevated replication fork speeds, post-replicative single stranded DNA exposure and DNA damage. These findings implicate EXO1 as a synthetic lethal vulnerability and promising drug target in a broad spectrum of DDR-deficient cancers unaddressed by current therapies.
Insights
Loss of Exonuclease EXO1 is synthetically lethal with DNA damage repair (DDR) gene deficiencies, offering new therapeutic targets for cancers. EXO1 loss creates vulnerabilities exploitable in Fanconi Anemia and ZRSR2-deficient cancers.
Area of Science:
- Molecular Biology
- Cancer Genomics
- DNA Repair
Background:
- Exonuclease EXO1 is crucial for DNA replication and repair.
- EXO1 loss is tolerated, suggesting compensatory mechanisms in cancer.
- Identifying vulnerabilities in DDR-deficient cancers is critical for new therapies.
Purpose of the Study:
- To identify synthetic lethal interactions with EXO1 loss in cancer.
- To explore EXO1 as a therapeutic target in DDR-deficient cancers.
- To elucidate the mechanisms driving synthetic lethality involving EXO1.
Main Methods:
- CRISPR screening to identify synthetic lethal interactions.
- Functional assays to assess DNA damage repair and cellular phenotypes.
- Analysis of replication-coupled repair pathways.
Main Results:
- EXO1 loss is synthetically lethal with Fanconi Anemia (FA) pathway and BRCA1-A complex genes.
- ZRSR2 deficiency is synthetically lethal with EXO1 loss, impairing FA pathway activation.
- FA or ZRSR2 deficiencies depend on EXO1 nuclease activity and are potentiated by PARP inhibitors or radiation.
- Dysregulated replication-coupled repair, including defective fork reversal, drives synthetic lethality.
Conclusions:
- EXO1 is a synthetic lethal vulnerability in a wide range of DDR-deficient cancers.
- Targeting EXO1 offers a promising therapeutic strategy for cancers with unrepaired DNA damage.
- Understanding EXO1's role in replication-coupled repair is key to developing novel cancer treatments.
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