Unravelling the Phosphorylation Landscape of Anthrax Toxin Receptor 1: Mechanisms and Functional Insights Through
Ayadathil Sujina1, Amal Fahma1, Suhail Subair1
1Centre for Integrative Omics Data Science (CIODS), Yenepoya (Deemed to be University), Mangalore, Karnataka, 575018, India.
Abstract:
Anthrax Toxin Receptor 1 (ANTXR1) is a transmembrane protein involved in various biological processes, including angiogenesis, cell adhesion, and migration. As a receptor for Bacillus anthracis toxins and the oncolytic Seneca Valley virus, ANTXR1 plays pivotal roles in extracellular matrix interactions, actin cytoskeleton organization, and tumor progression. Despite its relevance in cancer biology, ANTXR1 remains understudied from a phosphoproteomics perspective. In this study, we report the phosphoproteomic landscape of the ANTXR1 protein through a unique data integration strategy from a mass spectrometry-based phosphoproteomics perspective. Through robust statistical analyses, conserved phosphorylation events of ANTXR1 across diverse experimental conditions were linked to its upstream kinases and binary interactors to deduce specific events modulated through ANTXR1 phosphorylation. This computational analysis of curated datasets identified conserved ANTXR1 phosphorylation events along with similar and oppositely co-regulated phosphorylation events of adjunct proteins, revealing extensive regulatory networks of ANTXR1. Our findings provide phosphorylation-dependent interaction between ANTXR1 and FLNA and their upstream kinases and phosphobinding motifs, emphasizing their collective role in cell migration. Overall, the study enhances the integrative analysis of mass spectrometry-based phosphoproteomics data through bioinformatics and statistical approaches.
Insights
Anthrax Toxin Receptor 1 (ANTXR1) phosphorylation sites were mapped using integrated phosphoproteomics. This reveals regulatory networks and a phosphorylation-dependent interaction with FLNA, crucial for cell migration.
Area of Science:
- Biochemistry
- Molecular Biology
- Proteomics
Background:
- Anthrax Toxin Receptor 1 (ANTXR1) is a transmembrane protein implicated in angiogenesis, cell adhesion, and migration.
- ANTXR1 serves as a receptor for Bacillus anthracis toxins and Seneca Valley virus, influencing tumor progression.
- The phosphoproteomic landscape of ANTXR1 is largely unexplored, limiting understanding of its regulatory mechanisms.
Purpose of the Study:
- To comprehensively map the phosphoproteomic landscape of ANTXR1.
- To identify conserved phosphorylation sites and their associated upstream kinases and interactors.
- To elucidate the regulatory networks modulated by ANTXR1 phosphorylation, particularly in cell migration.
Main Methods:
- Utilized a unique data integration strategy for mass spectrometry-based phosphoproteomics.
- Performed robust statistical analyses to identify conserved phosphorylation events.
- Employed computational approaches to link phosphorylation events to upstream kinases and protein interactors.
Main Results:
- Identified conserved phosphorylation events on ANTXR1 across diverse experimental conditions.
- Revealed extensive regulatory networks through co-regulated phosphorylation events of ANTXR1 and adjunct proteins.
- Discovered a phosphorylation-dependent interaction between ANTXR1 and Filamin A (FLNA), including upstream kinases and phosphobinding motifs.
Conclusions:
- The study provides a detailed phosphoproteomic map of ANTXR1.
- Findings highlight the collective role of ANTXR1 and FLNA in cell migration through phosphorylation-dependent interactions.
- The work enhances integrative analysis of phosphoproteomics data using bioinformatics and statistical methods.
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